GeneRecords: a relational database for GenBank flat file parsing and data manipulation in personal computers

Extracting the desired data from a database entry for later analysis is a constant need in the biological sequence analysis community; GeneRecords 1.0 is a solution for GenBank biological flat file parsing, as it implements a structured representation of each feature and feature qualifier in GenBank...

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Veröffentlicht in:Bioinformatics 2004-11, Vol.20 (16), p.2883-2885
Hauptverfasser: D'Addabbo, P., Lenzi, L., Facchin, F., Casadei, R., Canaider, S., Vitale, L., Frabetti, F., Carinci, P., Zannotti, M., Strippoli, P.
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Sprache:eng
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Zusammenfassung:Extracting the desired data from a database entry for later analysis is a constant need in the biological sequence analysis community; GeneRecords 1.0 is a solution for GenBank biological flat file parsing, as it implements a structured representation of each feature and feature qualifier in GenBank following import in a common database managing system usable in a personal computer (Macintosh and Windows environments). This collection of related databases enables the local management of GenBank records, allowing indexing, retrieval and analysis of both information and sequences on a personal computer. Availability: the current release, including the FileMaker Pro runtime application (built for Windows and Macintosh environments), is freely available at http://apollo11.isto.unibo.it/software/
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/bth321