Diversity, genetic structure and core collection of mangaba (Hancornia speciosa) genebank

This work was developed with the objective of characterizing the variability and genetic structure of matrices and progenies of the Mangaba genebank of Embrapa Tabuleiros Costeiros, to define a core collection. From the matrix of seven accessions, 289 individuals were generated, evaluated by nine SS...

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Veröffentlicht in:Genetic resources and crop evolution 2024-02, Vol.71 (2), p.589-601
Hauptverfasser: da Silva, Ana Veruska Cruz, Gois, Itamara Bomfim, Soares, Adrielle Naiana Ribeiro, Lédo, Ana da Silva
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Sprache:eng
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Zusammenfassung:This work was developed with the objective of characterizing the variability and genetic structure of matrices and progenies of the Mangaba genebank of Embrapa Tabuleiros Costeiros, to define a core collection. From the matrix of seven accessions, 289 individuals were generated, evaluated by nine SSR markers. The characterization of genetic variability was performed from the estimates: average number of alleles observed (Na = 5.63) and effective (Ne = 2.71); Shannon Information Index (I = 1.04); Heterozygosity observed (Ho = 0.45) and expected (He = 0.51); Fixation index (f = 0.13); Percent polymorphism (%P = 90.47); and, Number of private alleles (Nap = 20). The analysis of molecular variance (AMOVA) identified that the largest proportion of genetic variation is present within accessions (92%). The estimates of genetic differentiation (G ST and R ST ) were considered low (
ISSN:0925-9864
1573-5109
DOI:10.1007/s10722-023-01643-3