Revealing the Solution Conformation and Hydration Structure of Type I Tropocollagen Using X‑ray Scattering and Molecular Dynamics Simulation

Hydration plays a crucial role in regulating the dispersion behavior of biomolecules in water, particularly in how pH-sensitive hydration water network forms around proteins. This study explores the conformation and hydration structure of Type-I tropocollagen using small- and wide-angle X-ray scatte...

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Veröffentlicht in:Biomacromolecules 2025-01, Vol.26 (1), p.449-458
Hauptverfasser: Shiu, Ying-Jen, Mansel, Bradley W., Liao, Kuei-Fen, Hsu, Ting-Wei, Chang, Je-Wei, Shih, Orion, Yeh, Yi-Qi, Allwang, Johannes, Jeng, U-Ser
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Sprache:eng
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Zusammenfassung:Hydration plays a crucial role in regulating the dispersion behavior of biomolecules in water, particularly in how pH-sensitive hydration water network forms around proteins. This study explores the conformation and hydration structure of Type-I tropocollagen using small- and wide-angle X-ray scattering (SWAXS) and molecular dynamics (MD) simulations. The results reveal that tropocollagen exhibits a significant softening conformation in solution, transitioning from its rod-like structure in tissues to a worm-like conformation, characterized by a reduced radius of gyration of 50 nm and a persistent length of 34 nm. The SWAXS-supported MD calculations further establish a hydration water network characterized by a 2.8 Å free-water exclusion zone where water molecules are largely hydrogen-bonded to the densely distributed polar groups on the tropocollagen surfaces. These first-layer water molecules are bridged by outer water molecules extending up to 4 Å from the protein surfaces, forming a major hydration shell that encapsulates the protein.
ISSN:1525-7797
1526-4602
1526-4602
DOI:10.1021/acs.biomac.4c01261