Methanochimaera problematica gen. nov., sp. nov., a novel methanoarchaeon isolated from cold seep sediment and reclassification of Methanomicrobium antiquum as Methanoeremita antiquus gen. nov., comb. nov

A hydrogenotrophic methanoarchaeon, designated strain FWC-SCC4 , was isolated from cold seep sediment of Four-Way Closure Ridge, offshore southwestern Taiwan. Strain FWC-SCC4 utilizes H /CO or formate, but not acetate, secondary alcohols, methylamines, methanol or ethanol for growth and methane prod...

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Veröffentlicht in:International journal of systematic and evolutionary microbiology 2024-12, Vol.74 (12)
Hauptverfasser: Zhou, Yang-Zhi, Lai, Mei-Chin, You, Yi-Ting, Lai, Shu-Jung, Wu, Sue-Yao, Hung, Chuan-Chuan, Ding, Jiun-Yan, Shih, Chao-Jen, Wu, Yen-Chi, Zhang, Wei-Ling, Chen, Sheng-Chung
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Sprache:eng
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Zusammenfassung:A hydrogenotrophic methanoarchaeon, designated strain FWC-SCC4 , was isolated from cold seep sediment of Four-Way Closure Ridge, offshore southwestern Taiwan. Strain FWC-SCC4 utilizes H /CO or formate, but not acetate, secondary alcohols, methylamines, methanol or ethanol for growth and methane production. Yeast extract is required for growth. The cell morphology is coccoid, with a diameter of 0.8-1.2 µm, and the cell envelope is composed of S-layer protein with M about 137.00 kDa. Cells possess multiple flagella and usually occur singly. Strain FWC-SCC4 grows at a temperature range of 20-40 °C (optimum 37 °C) and a pH range of 5.4-7.2 (optimum 7.0). The NaCl range for growth is 0-0.86 M (optimum 0.09 M). The result of phylogenetic analysis of 16S rRNA gene sequences indicates that the most closely related species are M3 and MC1 , with similarities of 95.95 and 95.63%, respectively. The G+C content of the genomic DNA is 40.3 mol%. The overall genome-relatedness indexes (OGRIs) and concatenated ribosomal protein (RBP) phylogenic analysis indicate that strain FWC-SCC4 is a novel lineage of . In addition to strain FWC-SCC4 , the differences between MobH and BP demonstrated by comparative analysis of genomic G+C content and phylogenetic analysis with non-type strain genomes are enough to support the establishment of a novel genus. In conclusion, strain FWC-SCC4 (BCRC AR10058 = NBRC 114595 ) is proposed as the type strain of gen. nov., sp. nov., and gen. nov., comb. nov. is proposed as the new name for MobH (=DSM 21220 = NBRC 104160 ).
ISSN:1466-5026
1466-5034
1466-5034
DOI:10.1099/ijsem.0.006593