Methanochimaera problematica gen. nov., sp. nov., a novel methanoarchaeon isolated from cold seep sediment and reclassification of Methanomicrobium antiquum as Methanoeremita antiquus gen. nov., comb. nov
A hydrogenotrophic methanoarchaeon, designated strain FWC-SCC4 , was isolated from cold seep sediment of Four-Way Closure Ridge, offshore southwestern Taiwan. Strain FWC-SCC4 utilizes H /CO or formate, but not acetate, secondary alcohols, methylamines, methanol or ethanol for growth and methane prod...
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Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2024-12, Vol.74 (12) |
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Sprache: | eng |
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Zusammenfassung: | A hydrogenotrophic methanoarchaeon, designated strain FWC-SCC4
, was isolated from cold seep sediment of Four-Way Closure Ridge, offshore southwestern Taiwan. Strain FWC-SCC4
utilizes H
/CO
or formate, but not acetate, secondary alcohols, methylamines, methanol or ethanol for growth and methane production. Yeast extract is required for growth. The cell morphology is coccoid, with a diameter of 0.8-1.2 µm, and the cell envelope is composed of S-layer protein with M
about 137.00 kDa. Cells possess multiple flagella and usually occur singly. Strain FWC-SCC4
grows at a temperature range of 20-40 °C (optimum 37 °C) and a pH range of 5.4-7.2 (optimum 7.0). The NaCl range for growth is 0-0.86 M (optimum 0.09 M). The result of phylogenetic analysis of 16S rRNA gene sequences indicates that the most closely related species are
M3
and
MC1
, with similarities of 95.95 and 95.63%, respectively. The G+C content of the genomic DNA is 40.3 mol%. The overall genome-relatedness indexes (OGRIs) and concatenated ribosomal protein (RBP) phylogenic analysis indicate that strain FWC-SCC4
is a novel lineage of
. In addition to strain FWC-SCC4
, the differences between
MobH
and
BP
demonstrated by comparative analysis of genomic G+C content and phylogenetic analysis with non-type strain genomes are enough to support the establishment of a novel genus. In conclusion, strain FWC-SCC4
(BCRC AR10058
= NBRC 114595
) is proposed as the type strain of
gen. nov., sp. nov., and
gen. nov., comb. nov. is proposed as the new name for
MobH
(=DSM 21220
= NBRC 104160
). |
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ISSN: | 1466-5026 1466-5034 1466-5034 |
DOI: | 10.1099/ijsem.0.006593 |