Ferroptosis-related genes in osteoporosis: a bioinformatics analysis and in vitro study

To explore ferroptosis-related genes in osteoporosis through bioinformatic analysis and study. Osteoporosis-related genes were identified from dataset GSE35958 in the Gene Expression Omnibus database; and the ferroptosis-related genes were identified from the FerrDb database. These were intersected...

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Veröffentlicht in:Zhejiang da xue xue bao. Journal of Zhejiang University. Medical sciences. Yi xue ban 2024-12, Vol.53 (6), p.680
Hauptverfasser: Xia, Yushuang, Wang, Bo, Pan, Pengfei, Ren, Xiangshun, Gao, Lixi, Xiong, Jian, Ma, Yan
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Sprache:chi
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Zusammenfassung:To explore ferroptosis-related genes in osteoporosis through bioinformatic analysis and study. Osteoporosis-related genes were identified from dataset GSE35958 in the Gene Expression Omnibus database; and the ferroptosis-related genes were identified from the FerrDb database. These were intersected with the differentially expressed genes in GSE35958 to obtain ferroptosis-related genes in osteoporosis. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis were performed for the differentially expressed genes. And Spearman correlation and protein-protein interaction network analysis were performed. Then, the hub genes of ferroptosis in osteoporosis were screened by Degree, MNC, EPC, MCC and DMNC in Cytoscape software CytoHubba plugin; and analyzed with receiver operating characteristic (ROC) curves. The bone marrow mesenchymal stem cells from osteoporosis patients (osteoporosis group) and non-osteoporosis patients (control group) were subjected to quantitative reverse transcr
ISSN:1008-9292
DOI:10.3724/zdxbyxb-2024-0089