Two new members of the genus Sphingobacterium : Sphingobacterium zhuxiongii sp. nov. and Sphingobacterium luzhongxinii sp. nov
Four strains, designated dk4302 , dk4209, xlx-73 , and xlx-183, were isolated from Tibetan gazelle and red swamp crawfish collected from the Qinghai-Tibet Plateau and Jiangxi Province, PR China. The strains were Gram-stain-negative, aerobic, rod-shaped, non-motile, mucoid, and yellow-pigmented. Stra...
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Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2024-08, Vol.74 (8) |
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Zusammenfassung: | Four strains, designated dk4302
, dk4209, xlx-73
, and xlx-183, were isolated from Tibetan gazelle and red swamp crawfish collected from the Qinghai-Tibet Plateau and Jiangxi Province, PR China. The strains were Gram-stain-negative, aerobic, rod-shaped, non-motile, mucoid, and yellow-pigmented. Strains dk4302
and dk4209 grew at 10-40 °C and pH 6.0-9.0, while strains xlx-73
/xlx-183 grew at 15-40 °C and pH 6.0-10.0. Both strains exhibited growth in the presence of up to 3.5 % (w/v) NaCl. Phylogenetic and phylogenomic analyses based on the 16S rRNA gene sequences and 652 core genes, respectively, revealed that the four strains formed two distinct clusters in the genus
. Strains dk4302
and dk4209 formed a distinct clade with
XH4
and
D1
. The most closely related strains to xlx-73
and xlx-183 were
M-SX103
. The DNA G+C contents were 38.9 and 39.8 mol%. The digital DNA-DNA hybridization (dDDH) values between dk4302
and
D1
and
XH4
were 19.2 and 21.8 % (19.0 and 21.6 % for strain dk4209), respectively. The corresponding average nucleotide identity (ANI) values were 74.3 and 78.1 % (74.4 and 78.3 % for strain dk4209), respectively. The dDDH values between xlx-73
(xlx-183) and
M-SX103
was 24.6 % (25.7 %). The corresponding ANI value was 85.7 % (85.5 % for strain xlx-183). The major fatty acid and respiratory quinone of dk4302
and xlx-73
were iso-C
and MK7. The polar lipids identified in all of the novel strains were phosphatidylethanolamine, phosphoglycolipids, aminophospholipids, and phospholipids. A total of 61/190 (32.1 %) and 82/190 (43.2 %) carbon substrates were metabolized by strains dk4302
and xlx-73
in the Biolog MicroPlates, respectively. Based on the results from this polyphasic taxonomic study, two novel species in the genus
are proposed, namely
sp. nov. (type strain dk4302
=CGMCC 1.16795
=JCM 33600
) and
sp. nov. (type strain xlx-73
=GDMCC 1.1712
=JCM 33886
). |
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ISSN: | 1466-5034 1466-5034 |
DOI: | 10.1099/ijsem.0.006488 |