Two new members of the genus Sphingobacterium : Sphingobacterium zhuxiongii sp. nov. and Sphingobacterium luzhongxinii sp. nov

Four strains, designated dk4302 , dk4209, xlx-73 , and xlx-183, were isolated from Tibetan gazelle and red swamp crawfish collected from the Qinghai-Tibet Plateau and Jiangxi Province, PR China. The strains were Gram-stain-negative, aerobic, rod-shaped, non-motile, mucoid, and yellow-pigmented. Stra...

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Veröffentlicht in:International journal of systematic and evolutionary microbiology 2024-08, Vol.74 (8)
Hauptverfasser: Tao, Yuanmeihui, Yang, Caixin, Dong, Kui, Luo, Wenbo, Ye, Lin, Pu, Ji, Yang, Jing, Zheng, Han, Xu, Jianguo
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Sprache:eng
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Zusammenfassung:Four strains, designated dk4302 , dk4209, xlx-73 , and xlx-183, were isolated from Tibetan gazelle and red swamp crawfish collected from the Qinghai-Tibet Plateau and Jiangxi Province, PR China. The strains were Gram-stain-negative, aerobic, rod-shaped, non-motile, mucoid, and yellow-pigmented. Strains dk4302 and dk4209 grew at 10-40 °C and pH 6.0-9.0, while strains xlx-73 /xlx-183 grew at 15-40 °C and pH 6.0-10.0. Both strains exhibited growth in the presence of up to 3.5 % (w/v) NaCl. Phylogenetic and phylogenomic analyses based on the 16S rRNA gene sequences and 652 core genes, respectively, revealed that the four strains formed two distinct clusters in the genus . Strains dk4302 and dk4209 formed a distinct clade with XH4 and D1 . The most closely related strains to xlx-73 and xlx-183 were M-SX103 . The DNA G+C contents were 38.9 and 39.8 mol%. The digital DNA-DNA hybridization (dDDH) values between dk4302 and D1 and XH4 were 19.2 and 21.8 % (19.0 and 21.6 % for strain dk4209), respectively. The corresponding average nucleotide identity (ANI) values were 74.3 and 78.1 % (74.4 and 78.3 % for strain dk4209), respectively. The dDDH values between xlx-73 (xlx-183) and M-SX103 was 24.6 % (25.7 %). The corresponding ANI value was 85.7 % (85.5 % for strain xlx-183). The major fatty acid and respiratory quinone of dk4302 and xlx-73 were iso-C and MK7. The polar lipids identified in all of the novel strains were phosphatidylethanolamine, phosphoglycolipids, aminophospholipids, and phospholipids. A total of 61/190 (32.1 %) and 82/190 (43.2 %) carbon substrates were metabolized by strains dk4302 and xlx-73 in the Biolog MicroPlates, respectively. Based on the results from this polyphasic taxonomic study, two novel species in the genus are proposed, namely sp. nov. (type strain dk4302 =CGMCC 1.16795 =JCM 33600 ) and sp. nov. (type strain xlx-73 =GDMCC 1.1712 =JCM 33886 ).
ISSN:1466-5034
1466-5034
DOI:10.1099/ijsem.0.006488