Rhizosphere shapes the associations between protistan predators and bacteria within microbiomes through the deterministic selection on bacterial communities

The assembly of bacterial communities in the rhizosphere is well‐documented and plays a crucial role in supporting plant performance. However, we have limited knowledge of how plant rhizosphere determines the assembly of protistan predators and whether the potential associations between protistan pr...

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Veröffentlicht in:Environmental microbiology 2023-12, Vol.25 (12), p.3623-3629
Hauptverfasser: Yue, Yang, Liu, Chen, Xu, Boting, Wang, Yijin, Lv, Qihui, Zhou, Zeyuan, Li, Rong, Kowalchuk, George A., Jousset, Alexandre, Shen, Qirong, Xiong, Wu
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Sprache:eng
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Zusammenfassung:The assembly of bacterial communities in the rhizosphere is well‐documented and plays a crucial role in supporting plant performance. However, we have limited knowledge of how plant rhizosphere determines the assembly of protistan predators and whether the potential associations between protistan predators and bacterial communities shift due to rhizosphere selection. To address this, we examined bacterial and protistan taxa from 443 agricultural soil samples including bulk and rhizosphere soils. Our results presented distinct patterns of bacteria and protistan predators in rhizosphere microbiome assembly. Community assembly of protistan predators was determined by a stochastic process in the rhizosphere and the diversity of protistan predators was reduced in the rhizosphere compared to bulk soils, these may be attributed to the indirect impacts from the altered bacterial communities that showed deterministic process assembly in the rhizosphere. Interestingly, we observed that the plant rhizosphere facilitates more close interrelationships between protistan predators and bacterial communities, which might promote a healthy rhizosphere microbial community for plant growth. Overall, our findings indicate that the potential predator–prey relationships within the microbiome, mediated by plant rhizosphere, might contribute to plant performance in agricultural ecosystems. Rhizosphere microbiome assembly plays important roles in supporting plant fitness. With examining bacterial and protistan taxa from 443 agricultural soils including bulk and rhizosphere samples, we found distinct patterns of bacteria and protistan predators in rhizosphere microbiome assembly, protistan predator assembly was determined by stochastic process with reduced diversity in rhizosphere, possibly due to indirect effects from bacteria by deterministic process. Our findings indicate that potential predator–prey relationships mediated by rhizosphere might affect plant performance.
ISSN:1462-2912
1462-2920
DOI:10.1111/1462-2920.16528