Updated Genome-Wide Association Study of Intracranial Aneurysms by Genotype Correction and Imputation in Koreans

Compared to European, Japanese, and Chinese populations, genetic studies on intracranial aneurysms (IAs) in Koreans are lacking. We conducted an updated genome-wide association study (GWAS) to more accurately identify candidate variations predicting IA by genotype correction and imputation than in t...

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Veröffentlicht in:World neurosurgery 2022-10, Vol.166, p.e109-e117
Hauptverfasser: Hong, Eun Pyo, Kim, Bong Jun, Youn, Dong Hyuk, Lee, Jae Jun, Jeon, Hong Jun, Choi, Hyuk Jai, Cho, Yong Jun, Jeon, Jin Pyeong
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Sprache:eng
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Zusammenfassung:Compared to European, Japanese, and Chinese populations, genetic studies on intracranial aneurysms (IAs) in Koreans are lacking. We conducted an updated genome-wide association study (GWAS) to more accurately identify candidate variations predicting IA by genotype correction and imputation than in the first Korean GWAS. We performed a high-throughput imputation of single-nucleotide polymorphisms (SNPs) and genotype missing values for 250 IA and 296 controls. Out of a total of 7,333,746 sites with an imputation R2 score of ≥0.5, 6,105,212 SNPs were analyzed. A high-throughput GWAS was performed after adjusting for clinical variables and 4 principal component analysis values. A total of 39 SNPs reached a significant genome-wide threshold (P 
ISSN:1878-8750
1878-8769
DOI:10.1016/j.wneu.2022.06.113