Arthrobacter terrae sp. nov., a psychrophilic actinobacterium with multi copies of capA gene isolated from Antarctic soil

A Gram-staining-positive, non-spore-forming, non-flagellated, ellipsoidal, strain Z1-20  T belonging to the genus Arthrobacter was isolated from a soil sample collected from the Zhongshan station, Antarctic. Phylogenetic analysis of the 16S rRNA gene sequences and phylogenetic analysis revealed that...

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Veröffentlicht in:Antonie van Leeuwenhoek 2022-05, Vol.115 (5), p.635-644
Hauptverfasser: Jiang, Peiqiang, Ren, Xintao, Wang, Wenjing, Niu, Guojiang, Li, Jing
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Sprache:eng
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Zusammenfassung:A Gram-staining-positive, non-spore-forming, non-flagellated, ellipsoidal, strain Z1-20  T belonging to the genus Arthrobacter was isolated from a soil sample collected from the Zhongshan station, Antarctic. Phylogenetic analysis of the 16S rRNA gene sequences and phylogenetic analysis revealed that strain Z1-20  T formed a unique single cluster in the genus Arthrobacter and shared high 16S rRNA sequence similarities of 97.1% and 96.9% with A. glacialis HLT2-12-2  T and A. psychrochitiniphilus GP3 T , respectively. Values of Digital DNA-DNA hybridization (dDDH) between strain Z1-20  T against A. glacialis HLT2-12-2  T and A. psychrochitiniphilus GP3 T were 20.3% and 13.8%, respectively. Average nucleotide identity (ANI) score between strain Z1-20  T against A. glacialis HLT2-12-2  T and A. psychrochitiniphilus GP3 T were 72.5% and 72.1%, respectively. Genes for the synthesis of the osmoprotectant glycine betaine and higher copies of cap A gene encoding cold shock protein were found in genome of Z1-20  T that may help Z1-20  T in cold-adaptation. Strain Z1-20  T comprised lysine as the diagnostic diamino acid. Based on the results of phylogenetic, phenotypic and chemotaxonomic features, strain Z1-20  T represents a novel species of a novel taxon of genus Arthrobacter , for which the name Arthrobacter terrae gen. nov., sp. nov. is proposed.
ISSN:0003-6072
1572-9699
DOI:10.1007/s10482-022-01727-7