Arthrobacter terrae sp. nov., a psychrophilic actinobacterium with multi copies of capA gene isolated from Antarctic soil
A Gram-staining-positive, non-spore-forming, non-flagellated, ellipsoidal, strain Z1-20 T belonging to the genus Arthrobacter was isolated from a soil sample collected from the Zhongshan station, Antarctic. Phylogenetic analysis of the 16S rRNA gene sequences and phylogenetic analysis revealed that...
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Veröffentlicht in: | Antonie van Leeuwenhoek 2022-05, Vol.115 (5), p.635-644 |
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Zusammenfassung: | A Gram-staining-positive, non-spore-forming, non-flagellated, ellipsoidal, strain Z1-20
T
belonging to the genus
Arthrobacter
was isolated from a soil sample collected from the Zhongshan station, Antarctic. Phylogenetic analysis of the 16S rRNA gene sequences and phylogenetic analysis revealed that strain Z1-20
T
formed a unique single cluster in the genus
Arthrobacter
and shared high 16S rRNA sequence similarities of 97.1% and 96.9% with
A. glacialis
HLT2-12-2
T
and
A. psychrochitiniphilus
GP3
T
, respectively. Values of Digital DNA-DNA hybridization (dDDH) between strain Z1-20
T
against
A. glacialis
HLT2-12-2
T
and
A. psychrochitiniphilus
GP3
T
were 20.3% and 13.8%, respectively. Average nucleotide identity (ANI) score between strain Z1-20
T
against
A. glacialis
HLT2-12-2
T
and
A. psychrochitiniphilus
GP3
T
were 72.5% and 72.1%, respectively. Genes for the synthesis of the osmoprotectant glycine betaine and higher copies of
cap
A gene encoding cold shock protein were found in genome of Z1-20
T
that may help Z1-20
T
in cold-adaptation. Strain Z1-20
T
comprised lysine as the diagnostic diamino acid. Based on the results of phylogenetic, phenotypic and chemotaxonomic features, strain Z1-20
T
represents a novel species of a novel taxon of genus
Arthrobacter
, for which the name
Arthrobacter terrae
gen. nov., sp. nov. is proposed. |
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ISSN: | 0003-6072 1572-9699 |
DOI: | 10.1007/s10482-022-01727-7 |