Echinicola arenosa sp. nov., isolated from marine sand
A novel bacterium, designated CAU 1574 T , was isolated from marine sand. Cells were Gram stain negative, aerobic, gliding and rod shaped. Growth was observed at 20–37 °C (optimum, 30 °C), a pH of 5.5–10.0 (optimum, 8.0), and 0–3.0% (w/v) NaCl concentrations (optimum, 1%). Based on the results of 16...
Gespeichert in:
Veröffentlicht in: | Archives of microbiology 2021-11, Vol.203 (9), p.5675-5681 |
---|---|
Hauptverfasser: | , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
Zusammenfassung: | A novel bacterium, designated CAU 1574
T
, was isolated from marine sand. Cells were Gram stain negative, aerobic, gliding and rod shaped. Growth was observed at 20–37 °C (optimum, 30 °C), a pH of 5.5–10.0 (optimum, 8.0), and 0–3.0% (w/v) NaCl concentrations (optimum, 1%). Based on the results of 16S rRNA gene sequence analyses, strain CAU 1574
T
belonged to the genus
Echinicola
, and showed the highest similarity to
Echinicola shivajiensis
JCM 17847
T
(97.5%). Phylogenomic analysis based on consisting of 92 core genes extracted from the genome sequences showed that strain CAU 1574
T
was affiliated with species in the genus
Echinicola
. The average nucleotide identity (ANI), average amino acid identity (AAI), and digital DNA–DNA hybridization (dDDH) values between strain CAU 1574
T
and the closely related species were below the cut-off values of 95–96, 90, and 70%, respectively used for species demarcation. The chemotaxonomic data of CAU 1574
T
were as follows: major isoprenoid quinone, MK-7; predominant polar lipids, phosphatidylethanolamine, two unidentified aminophospholipids and two unidentified lipids; major fatty acids, iso-C
15:0
, summed feature 3 (C
16:1
ω
6
c
/C
16:1
ω
7
c
). The 5.4 Mb genome included 20 contigs and 4237 protein-coding genes with a 39.8 mol% G + C content. Based on the phylogenetic, phenotypic, and physiological result, strain CAU 1574
T
represents a novel species of this genus
Echinicola
, for which the name
Echinicola arenosa
sp. nov. is proposed. The type strain is CAU 1574
T
(= KCTC 82410
T
= MCCC 1K05669
T
). |
---|---|
ISSN: | 0302-8933 1432-072X |
DOI: | 10.1007/s00203-021-02553-7 |