Nakamurella leprariae sp. nov., isolated from a lichen sample

A novel actinobacterium, YIM 132084 T , was isolated from Lepraria sp. lichen collected from Yunnan province, south-west PR China and identified by a polyphasic taxonomic approach. The strain was Gram-stain-positive, aerobic, catalase-positive, oxidase-negative, non-motile and coccus-shaped. Colonies were round, convex, smooth and light orange yellow in color. It grew at 10–40 °C (optimum 28 °C), at pH 6.0–11.0 (optimum pH 7.0) and in the presence of 0–4% NaCl (optimum 0%). Strain YIM 132084 T comprised diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol as the major polar lipids, MK-8(H 4 ) as the predominant menaquinone, and anteiso -C 15:0 , anteiso -C 17:0 , iso -C 15:0 and iso -C 16:0 as major fatty acids. Strain YIM 132084 T had meso -diaminopimelic acid as the diagnostic diamino acid in the cell-wall peptidoglycan, and mannose, ribose, glucose and rhamnose as whole-cell sugars. The 16S rRNA gene sequence showed high level of similarity with Nakamurella flavida KCTC 19127 T (97.7%) and Nakamurella flava CGMCC 4.7524 T (97.7%). The G + C content of the genomic DNA was 72.4 mol%. Based on draft genome sequences, strain YIM 132084 T showed an average nucleotide identity value of 76.1% and 74.9%, a digital DNA–DNA hybridization value of 20.9% and 20.6% with the reference strains Nakamurella flavida and Nakamurella flava , respectively. The results of the phenotypic, chemotaxonomic and phylogenetic analyses showed that strain YIM 132084 T represents a novel species of the genus Nakamurella , for which the name Nakamurella leprariae sp. nov. is proposed. The type strain is YIM 132084 T (= CGMCC 4.7667 T = NBRC 114280 T = KCTC 49367 T ).