Pseudomonas tohonis sp. nov., isolated from the skin of a patient with burn wounds in Japan
Strain TUM18999 was isolated from the skin of a patient with burn wounds in Japan. The strain was successfully cultured at 20-42 °C (optimum, 30-35 °C) in 1.0-4.0% NaCl (w/v) and at pH 5.5-9.5, optimum pH 5.5-8.5. The phylogenetic tree reconstructed using 16S rRNA, , and gene sequences indicated tha...
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Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2021-11, Vol.71 (11) |
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Hauptverfasser: | , , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
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Zusammenfassung: | Strain TUM18999
was isolated from the skin of a patient with burn wounds in Japan. The strain was successfully cultured at 20-42 °C (optimum, 30-35 °C) in 1.0-4.0% NaCl (w/v) and at pH 5.5-9.5, optimum pH 5.5-8.5. The phylogenetic tree reconstructed using 16S rRNA,
,
and
gene sequences indicated that strain TUM18999
is closely related to
MCC10330
. Although the partial 16S rRNA gene sequence (1412 bp) of TUM18999
exhibits high similarity to those of
NBRC 14159
(99.08 %) and
MCC10330
(98.51 %), multi-locus sequence analysis using 16S rRNA,
,
and
genes reveals a clear distinction between TUM18999
and other
species. In addition, an average nucleotide identity >90 % was not observed in the
group. Moreover, TUM18999
and
can be distinguished based on the minimum inhibitory concentration for carbapenem. Meanwhile, the cellular fatty acids are enriched with C
7
/C
6
(34.35 %), C
7
/C
6
(24.22 %), C
(19.79 %) and C
(8.25 %). Based on this evidence, strain TUM18999
can be defined as representing a novel
species, with the proposed name
sp. nov. The type strain is TUM18999
(GTC 22698
=NCTC 14580
). |
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ISSN: | 1466-5026 1466-5034 |
DOI: | 10.1099/ijsem.0.005115 |