DNA purification using a novel γ-Fe2O3/PEDOT hybrid nanocomposite

We report the synthesis and characterization of a new hybrid magnetic composite formed by the enveloping of magnetic iron oxide nanoparticles (γ-NP) with chains of the conductive polymer PEDOT, and its use for the efficient separation of DNA molecules from complex biological samples, allowing the hi...

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Veröffentlicht in:Analytica chimica acta 2021-09, Vol.1178, p.338762-338762, Article 338762
Hauptverfasser: da Silva, Romário J., Pedro, Graciela C., Gorza, Filipe D.S., Maciel, Bruna G., Ratkovski, Gabriela P., Mojica-Sánchez, Lizeth Carolina, Medina-Llamas, Juan C., Chávez-Guajardo, Alicia E., de Melo, Celso P.
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Sprache:eng
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Zusammenfassung:We report the synthesis and characterization of a new hybrid magnetic composite formed by the enveloping of magnetic iron oxide nanoparticles (γ-NP) with chains of the conductive polymer PEDOT, and its use for the efficient separation of DNA molecules from complex biological samples, allowing the high yield separation of a pure and high-quality DNA fraction. The successful formation of the γ-NP/PEDOT composite was confirmed by Fourier transform infrared spectroscopy, scanning electron microscopy, UV visible spectroscopy (UV–Vis), and magnetic hysteresis loop measurements. The nanocomposites showed an excellent capacity of DNA adsorption (Qe ∼ 248 mg/g) in a model system consisting of salmon sperm DNA. When the γ-NP/PEDOT was used in protocols to extract the DNA from complex samples, the corresponding yield was in the range of 6.4 μg (blood) and 7.3 μg (bacteria), as evaluated quality by UV–Vis, PCR analysis, and electrophoresis assays. We also established that the captured DNA does not need to be detached from the nanocomposite for use as seeding material in PCR amplification experiments. These results and the simplicity of the protocols indicate that the γ-NP/PEDOT composite is a promising DNA absorbent, being competitive with the commercially available magnetic purification kits. [Display omitted] •The γ-NP/PEDOT nanocomposite exhibits a high capacity for fast DNA adsorption.•The desorption of the adsorbed ss-DNA chains is simple and fast.•The γ-NP/PEDOT nanocomposite can be used for enriching the extracted DNA fraction.•The yield and purity of the DNA extracted are similar to those of commercial purification kits.
ISSN:0003-2670
1873-4324
DOI:10.1016/j.aca.2021.338762