A guide to accurate reporting in digital image processing - can anyone reproduce your quantitative analysis?

Considerable attention has been recently paid to improving replicability and reproducibility in life science research. This has resulted in commendable efforts to standardize a variety of reagents, assays, cell lines and other resources. However, given that microscopy is a dominant tool for biologis...

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Veröffentlicht in:Journal of cell science 2021-03, Vol.134 (6)
Hauptverfasser: Aaron, Jesse, Chew, Teng-Leong
Format: Artikel
Sprache:eng
Online-Zugang:Volltext
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Zusammenfassung:Considerable attention has been recently paid to improving replicability and reproducibility in life science research. This has resulted in commendable efforts to standardize a variety of reagents, assays, cell lines and other resources. However, given that microscopy is a dominant tool for biologists, comparatively little discussion has been offered regarding how the proper reporting and documentation of microscopy relevant details should be handled. Image processing is a critical step of almost any microscopy-based experiment; however, improper, or incomplete reporting of its use in the literature is pervasive. The chosen details of an image processing workflow can dramatically determine the outcome of subsequent analyses, and indeed, the overall conclusions of a study. This Review aims to illustrate how proper reporting of image processing methodology improves scientific reproducibility and strengthens the biological conclusions derived from the results.
ISSN:0021-9533
1477-9137
DOI:10.1242/jcs.254151