Vibrio marinisediminis sp. nov., Isolated from Marine Sediment
A novel Gram-stain-negative, facultative anaerobic, motile bacterium, designated as 404 T , was isolated from a marine sediment sample in the Bohai Gulf, China. Growth was observed at 10–35 °C (optimum, 20–25 °C) and in the presence of 1.0–6.0% (w/v) NaCl (optimum, 1.0–3.0%). Phylogenetic analysis b...
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Veröffentlicht in: | Current microbiology 2021-02, Vol.78 (2), p.810-815 |
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Sprache: | eng |
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Zusammenfassung: | A novel Gram-stain-negative, facultative anaerobic, motile bacterium, designated as 404
T
, was isolated from a marine sediment sample in the Bohai Gulf, China. Growth was observed at 10–35 °C (optimum, 20–25 °C) and in the presence of 1.0–6.0% (w/v) NaCl (optimum, 1.0–3.0%). Phylogenetic analysis based on 16S rRNA gene sequences indicated that the strain 404
T
belonged to the genus
Vibrio
, showing the highest sequence similarity to
Vibrio renipiscarius
KCTC 42287
T
(97.6%). The draft genome is 4.5 Mb in length, containing 4278 protein-coding genes, 60 tRNA genes and 9 rRNA genes, and DNA G+C content is 44.1 mol%. Strain 404
T
contains phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylcholine, and phospholipid as the main polar lipids, and the predominant quinone is ubiquinone Q-8. The major cellular fatty acids (>8.0%) are C
16 : 1
ω6
c
and/or C
16 : 1
ω7
c
, C
16 : 0
, C
18 : 1
ω6
c
and/or C
18 : 1
ω7
c
. Strain 404
T
shows some typical characteristics among the members of genus
Vibrio
, while it can be clearly distinguished from the closely related type strains through genome analysis (average nucleotide identity and digital DNA–DNA hybridization values), fatty acid composition and a series of physiological and biochemical characteristics. On the basis of the polyphasic analysis, strain 404
T
is considered to represent a novel species of the genus
Vibrio
, for which the name
Vibrio marinisediminis
sp. nov., is proposed. The type strain is 404
T
(= MCCC 1H00367
T
= KCTC 62958
T
). |
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ISSN: | 0343-8651 1432-0991 |
DOI: | 10.1007/s00284-020-02290-y |