Pseudomonas laoshanensis sp. nov., isolated from peanut field soil
A novel Gram-stain-negative, aerobic strain, designated Y22 T , was isolated from peanut field soil in Laoshan Mountain in China. Cells of strain Y22 T were rod-shaped and motile by a single flagellum. The strain was found to be oxidase- and catalase-positive. 16S rRNA gene sequence based on phyloge...
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Veröffentlicht in: | Archives of microbiology 2021-03, Vol.203 (2), p.829-834 |
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Zusammenfassung: | A novel Gram-stain-negative, aerobic strain, designated Y22
T
, was isolated from peanut field soil in Laoshan Mountain in China. Cells of strain Y22
T
were rod-shaped and motile by a single flagellum. The strain was found to be oxidase- and catalase-positive. 16S rRNA gene sequence based on phylogenetic analysis indicated that strain Y22
T
belonged to the genus
Pseudomonas
, and showed the highest 16S rRNA gene sequence similarity of 99.0% to
Pseudomonas pelagia
JCM 15562
T
, followed by
Pseudomonas salina
JCM 19469
T
(98.4%),
Pseudomonas sabulinigri
JCM 14963
T
(97.9%),
Pseudomonas bauzanensis
CGMCC 1.9095
T
(97.6%) and
Pseudomonas litoralis
KCTC23093
T
(97.5%). The phylogenetic analysis based on multilocus sequence analyses with concatenated 16S rRNA,
gyrB
,
rpoD
and
rpoB
genes indicated that strain Y22
T
belonged to
Pseudomonas pertucinogena
lineage. The average nucleotide identity scores between strain Y22
T
and closely related species were 74.6–82.8%, and the Genome-to-Genome Distance Calculator scores were 16.4–44.9%. The predominant cellular fatty acids of strain Y22
T
were C
18:1
ω
7c (29.6%), C
17:0
cyclo (17.5%) and summed feature 3 (C
16:1
ω
7c and/or C
16:1
ω
6c) (17.4%). The genomic DNA G+C content was 57.9 mol%. On the basis of phenotypic characteristics, phylogenetic analyses and in silico DNA–DNA relatedness, a novel species,
Pseudomonas laoshanensis
sp. nov. is proposed. The type strain is Y22
T
(= JCM 32580
T
= KCTC 62385
T
= CGMCC 1.16552
T
). |
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ISSN: | 0302-8933 1432-072X |
DOI: | 10.1007/s00203-020-02067-8 |