Pseudomonas laoshanensis sp. nov., isolated from peanut field soil

A novel Gram-stain-negative, aerobic strain, designated Y22 T , was isolated from peanut field soil in Laoshan Mountain in China. Cells of strain Y22 T were rod-shaped and motile by a single flagellum. The strain was found to be oxidase- and catalase-positive. 16S rRNA gene sequence based on phyloge...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Archives of microbiology 2021-03, Vol.203 (2), p.829-834
Hauptverfasser: Wang, Ming-Qing, Zhang, Chu-Shu, Yu, Li-Na, Yang, Wei-Qiang, Jiao, Kun, Gong, Kui-Jie, Chi, Xiao-Yuan, Bi, Jie, Song, Yu, Yang, Qing-Li, Zhang, Jian-Cheng, Yang, Gui-Wen, Sun, Jie
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Beschreibung
Zusammenfassung:A novel Gram-stain-negative, aerobic strain, designated Y22 T , was isolated from peanut field soil in Laoshan Mountain in China. Cells of strain Y22 T were rod-shaped and motile by a single flagellum. The strain was found to be oxidase- and catalase-positive. 16S rRNA gene sequence based on phylogenetic analysis indicated that strain Y22 T belonged to the genus Pseudomonas , and showed the highest 16S rRNA gene sequence similarity of 99.0% to Pseudomonas pelagia JCM 15562 T , followed by Pseudomonas salina JCM 19469 T (98.4%), Pseudomonas sabulinigri JCM 14963 T (97.9%), Pseudomonas bauzanensis CGMCC 1.9095 T (97.6%) and Pseudomonas litoralis KCTC23093 T (97.5%). The phylogenetic analysis based on multilocus sequence analyses with concatenated 16S rRNA, gyrB , rpoD and rpoB genes indicated that strain Y22 T belonged to Pseudomonas pertucinogena lineage. The average nucleotide identity scores between strain Y22 T and closely related species were 74.6–82.8%, and the Genome-to-Genome Distance Calculator scores were 16.4–44.9%. The predominant cellular fatty acids of strain Y22 T were C 18:1 ω 7c (29.6%), C 17:0 cyclo (17.5%) and summed feature 3 (C 16:1 ω 7c and/or C 16:1 ω 6c) (17.4%). The genomic DNA G+C content was 57.9 mol%. On the basis of phenotypic characteristics, phylogenetic analyses and in silico DNA–DNA relatedness, a novel species, Pseudomonas laoshanensis sp. nov. is proposed. The type strain is Y22 T (= JCM 32580 T  = KCTC 62385 T  = CGMCC 1.16552 T ).
ISSN:0302-8933
1432-072X
DOI:10.1007/s00203-020-02067-8