Glaciimonas soli sp. nov., a soil bacterium isolated from the forest of a high elevation mountain
A Gram-negative, psychrophilic bacterium, designated strain GS1 T , was isolated from a forest soil sample collected from the West Peak of Mt. Yushan, Yushan National Park, Taiwan. Cells grown in broth cultures were mostly non-motile and non-flagellated, whereas motile cells with monotrichous, subpo...
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Veröffentlicht in: | Antonie van Leeuwenhoek 2020-08, Vol.113 (8), p.1213-1223 |
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Zusammenfassung: | A Gram-negative, psychrophilic bacterium, designated strain GS1
T
, was isolated from a forest soil sample collected from the West Peak of Mt. Yushan, Yushan National Park, Taiwan. Cells grown in broth cultures were mostly non-motile and non-flagellated, whereas motile cells with monotrichous, subpolar flagella were also observed. The novel strain grew over a temperature range of 4–25 °C with optimum growth at 10–15 °C. It grew aerobically and was not capable of anaerobic growth by fermentation of
d
-glucose or other carbohydrates. Ubiquinone 8 was the predominant isoprenoid quinone. The major polar lipids comprised phosphatidylethanolamine, diphosphatidylglycerol and dimethylaminoethanol. Cellular fatty acids were dominated by C
16:1
ω7c
(35.2%), C
16:0
(19.5%), C
18:1
ω7c
(18.8%) and C
17:0
ω7c
cyclo (15.5%). The DNA G + C content was 49.2 mol% evaluated according to the genomic sequencing data. Strain GS1
T
shared more than 96.5% 16S rRNA gene sequence similarities with type strains of four
Collimonas
species (97.2–97.5%), three
Glaciimonas
species (97.3% for each of the three) and
Oxalicibacterium solurbis
(96.5%). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain GS1
T
formed a stable genus-level clade with type strains of species in the genus
Glaciimonas
in the family
Oxalobacteraceae
and GS1
T
was an outgroup with respect to these
Glaciimonas
species. Characteristically, strain GS1
T
could be easily distinguished from the recognised
Glaciimonas
species by exhibition of swimming motility with monotrichous, subpolar flagellum in some of the cells, ability to grow in NaCl at 2% but not at 3% and the distinguishable fatty acid profiles. On the basis of the polyphasic taxonomic data from this study, strain GS1
T
is considered to represent a novel species of the genus
Glaciimonas
, for which the name
Glaciimonas soli
sp. nov. is proposed. The type strain is GS1
T
(= JCM 33275
T
= BCRC 81091
T
). |
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ISSN: | 0003-6072 1572-9699 |
DOI: | 10.1007/s10482-020-01428-z |