Streptomyces mimosae sp. nov., an endophytic actinomycete isolated from the root of Mimosa pudica in Thailand

An endophytic actinomycete, strain 3MP-10 , isolated from the root of was taxonomically studied based upon polyphasic approaches. This strain formed spiral spore chains on aerial mycelia. ll-Diaminopimelic acid, glucose and ribose were found in the whole-cell hydrolysates. It belonged to the genus a...

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Veröffentlicht in:International journal of systematic and evolutionary microbiology 2020-05, Vol.70 (5), p.3316-3322
Hauptverfasser: Klykleung, Nattaporn, Yuki, Masahiro, Kudo, Takuji, Ohkuma, Moriya, Phongsopitanun, Wongsakorn, Inahashi, Yuki, Matsumoto, Atsuko, Tanasupawat, Somboon
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Sprache:eng
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Zusammenfassung:An endophytic actinomycete, strain 3MP-10 , isolated from the root of was taxonomically studied based upon polyphasic approaches. This strain formed spiral spore chains on aerial mycelia. ll-Diaminopimelic acid, glucose and ribose were found in the whole-cell hydrolysates. It belonged to the genus and was closely related to DSM 42101 (98.9 %) and JCM 16909 (98.6 %) based on 16S rRNA gene sequence analysis results. The major menaquinones were MK-10(H ), MK-10(H ) and MK-9(H ). The predominant cellular fatty acids were iso C , anteiso-C and anteiso C . The detected phospholipids were diphosphatidylglycerol, phosphatidylinositol mannoside, phosphatidylinositol, phosphatidylethanolamine and phosphatidylglycerol. Strain 3MP-10 had a genome size of 7.2 Mb with a genome G+C content of 73.4 mol%. Results of genome-based similarity analysis revealed ANIb values of 84.94 and 84.77 %, ANIm values of 88.01 and 87.92 %, and dDDH values of 29.9 and 29.6 % when compared with DSM 42101 and JCM 16909 , respectively. Based on the polyphasic approach, digital DNA-DNA relatedness and average nucleotide identity, we propose that the novel actinomycete represents a novel species, , with type strain 3MP-10 (=JCM 33328 =TISTR 2646 ).
ISSN:1466-5026
1466-5034
DOI:10.1099/ijsem.0.004170