Integration of Cryo-EM Model Building Software in Scipion

Advances in cryo-electron microscopy (cryo-EM) have made it possible to obtain structures of large biological macromolecules at near-atomic resolution. This “resolution revolution” has encouraged the use and development of modeling tools able to produce high-quality atomic models from cryo-EM densit...

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Veröffentlicht in:Journal of chemical information and modeling 2020-05, Vol.60 (5), p.2533-2540
Hauptverfasser: Martínez, M, Jiménez-Moreno, A, Maluenda, D, Ramírez-Aportela, E, Melero, R, Cuervo, A, Conesa, P, del Caño, L, Fonseca, Y. C, Sánchez-García, R, Strelak, D, Conesa, J. J, Fernández-Giménez, E, de Isidro, F, Sorzano, C. O. S, Carazo, J. M, Marabini, R
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Sprache:eng
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Zusammenfassung:Advances in cryo-electron microscopy (cryo-EM) have made it possible to obtain structures of large biological macromolecules at near-atomic resolution. This “resolution revolution” has encouraged the use and development of modeling tools able to produce high-quality atomic models from cryo-EM density maps. Unfortunately, many practical problems appear when combining different packages in the same processing workflow, which make difficult the use of these tools by non-experts and, therefore, reduce their utility. We present here a major extension of the image processing framework Scipion that provides inter-package integration in the model building area and full tracking of the complete workflow, from image processing to structure validation.
ISSN:1549-9596
1549-960X
DOI:10.1021/acs.jcim.9b01032