Lacibacter luteus sp. nov., isolated from a freshwater river
An isolate, designated TTM-7 , recovered from a freshwater river in Taiwan, was characterized using a polyphasic taxonomy approach. Phylogenetic analyses based on 16S rRNA gene sequences and an up-to-date bacterial core gene set (92 protein clusters) indicated that strain TTM-7 is affiliated with sp...
Gespeichert in:
Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2020-02, Vol.70 (2), p.1404-1411 |
---|---|
Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
Zusammenfassung: | An isolate, designated TTM-7
, recovered from a freshwater river in Taiwan, was characterized using a polyphasic taxonomy approach. Phylogenetic analyses based on 16S rRNA gene sequences and an up-to-date bacterial core gene set (92 protein clusters) indicated that strain TTM-7
is affiliated with species in the genus
. Strain TTM-7
was most closely related to
NJ-8
with a 98.2 % 16S rRNA gene sequence similarity, followed by
H32-4
(97.4 %) and
SS2-56
(96.3 %). Cells were Gram-stain-negative, aerobic, motile by gliding, rod-shaped and formed orange colonies. Optimal growth occurred at 25 °C, pH 7 and 0 % NaCl. The major fatty acids of strain TTM-7
were iso-C
, summed feature 3 (comprising C
ω
c/C
ω
and/or iso-C
2-OH) and iso-C
G. The predominant hydroxy fatty acid was iso-C
3-OH. The polar lipid profile consisted of a mixture of phosphatidylethanolamine, two unidentified aminoglycolipids, five unidentified aminophospholipids and one unidentified lipid. The major isoprenoid quinone was MK-7. Genomic DNA G+C content of strain TTM-7
was 40.6 mol%. Strain TTM-7
showed 83.6 % average nucleotide identity and 16.0 % digital DNA-DNA hybridization identity with
NJ-8
. On the basis of phenotypic and genotypic properties and phylogenetic inference, strain TTM-7
should be classified in a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is TTM-7
(=BCRC 81159
=LMG 30926
=KCTC 62870
). |
---|---|
ISSN: | 1466-5026 1466-5034 |
DOI: | 10.1099/ijsem.0.003926 |