Determining the Polymorphism Information Content of a molecular marker

•PIC measures molecular markers’ quality for genetic analyses.•There are several equations for PIC calculation.•We propose a simplified equation for PIC calculation for dominant markers. This review was carried out with the purpose of contributing to the discussion on the equations used in calculati...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Gene 2020-02, Vol.726, p.144175-144175, Article 144175
Hauptverfasser: Serrote, Caetano Miguel Lemos, Reiniger, Lia Rejane Silveira, Silva, Karol Buuron, Rabaiolli, Silvia Machado dos Santos, Stefanel, Charlene Moro
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Beschreibung
Zusammenfassung:•PIC measures molecular markers’ quality for genetic analyses.•There are several equations for PIC calculation.•We propose a simplified equation for PIC calculation for dominant markers. This review was carried out with the purpose of contributing to the discussion on the equations used in calculating the Polymorphism Information Content (PIC) of molecular markers. PIC measures the ability of a marker to detect polymorphisms, and therefore has enormous importance in selecting markers for genetic studies. We perform a summary analysis of PIC and its difference in relation to heterozygosity, another parameter used to evaluate the quality of a marker, presenting and discussing the several equations registered in the literature for both dominant and codominant markers. Finally, we present a brief direction on estimating PIC for dominant markers.
ISSN:0378-1119
1879-0038
DOI:10.1016/j.gene.2019.144175