A carefully designed nanoplatform based on multi walled carbon nanotube wrapped with aptamers

[Display omitted] •Noncovalent functionalization is an efficient strategy for interaction between MWCNT and Apt3 aptamer.•Removal of excess biomolecule reveals the actual surface of the nanocomplex.•MWCNT-Apt3 nanocomplex is stable in aqueous solution.•The structural integrity of the aptamer nucleotide sequence was maintained in the MWCNT-Apt3.•MWCNT-Apt3 nanocomplex did not induce considerable cytotoxic effects. The interaction between carbon nanotubes (CNTs) and biological molecules of diagnostic and therapeutic interest, as well as the internalization of the CNTs-biomolecules complexes in different types of cell, has been extensively studied due to the potential use of these nanocomplexes as multifunctional nanoplatforms in a great variety of biomedical applications. The effective use of these nanobiotechnologies requires broad multidisciplinary studies of biocompatibility, regarding, for example, the in vitro and in vivo nanotoxicological assays, the capacity to target specific cells and the evaluation of their biomedical potential. However, the first step to be reached is the careful obtainment of the nanoplatform and the understanding of the actual surface composition and structural integrity of the complex system. In this work, we show the detailed construction of a nanoplatform created by the noncovalent interaction between oxidized multi walled carbon nanotubes (MWCNTs) and a DNA aptamer targeting tumor cells. The excess free aptamer was removed by successive washes, revealing the actual surface of the nanocomplex. The MWCNT-aptamer interaction by π-stacking was evidenced and shown to contribute in obtaining a stable nanocomplex compatible with aqueous media having good cell viability. The nucleotide sequence of the aptamer remained intact after the functionalization, allowing its use in further studies of specificity and binding affinity and for the construction of functional nanoplatforms.