XCMS-MRM and METLIN-MRM: a cloud library and public resource for targeted analysis of small molecules

We report XCMS-MRM and METLIN-MRM ( http://xcmsonline-mrm.scripps.edu/ and http://metlin.scripps.edu/ ), a cloud-based data-analysis platform and a public multiple-reaction monitoring (MRM) transition repository for small-molecule quantitative tandem mass spectrometry. This platform provides MRM tra...

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Veröffentlicht in:Nature methods 2018-09, Vol.15 (9), p.681-684
Hauptverfasser: Domingo-Almenara, Xavier, Montenegro-Burke, J. Rafael, Ivanisevic, Julijana, Thomas, Aurelien, Sidibé, Jonathan, Teav, Tony, Guijas, Carlos, Aisporna, Aries E., Rinehart, Duane, Hoang, Linh, Nordström, Anders, Gómez-Romero, María, Whiley, Luke, Lewis, Matthew R., Nicholson, Jeremy K., Benton, H. Paul, Siuzdak, Gary
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Sprache:eng
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Zusammenfassung:We report XCMS-MRM and METLIN-MRM ( http://xcmsonline-mrm.scripps.edu/ and http://metlin.scripps.edu/ ), a cloud-based data-analysis platform and a public multiple-reaction monitoring (MRM) transition repository for small-molecule quantitative tandem mass spectrometry. This platform provides MRM transitions for more than 15,500 molecules and facilitates data sharing across different instruments and laboratories. A resource of multiple reaction monitoring–mass spectrometry transitions for quantitative analysis of biological small molecules is provided in METLIN-MRM, along with automated tools for analyzing such data in XCMS-MRM.
ISSN:1548-7091
1548-7105
1548-7105
DOI:10.1038/s41592-018-0110-3