Draft Genome and Description of Eisenbergiella massiliensis Strain AT11T: A New Species Isolated from Human Feces After Bariatric Surgery
A novel strain of a Gram-stain negative, non-motile, non-spore forming rod-shaped, obligate anaerobic bacterium, designated AT11 T , was isolated from a stool sample of a morbidly obese woman living in Marseille, France. This bacterium was characterized using biochemical, chemotaxonomic, and phyloge...
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Veröffentlicht in: | Current microbiology 2018-10, Vol.75 (10), p.1274-1281 |
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Zusammenfassung: | A novel strain of a Gram-stain negative, non-motile, non-spore forming rod-shaped, obligate anaerobic bacterium, designated AT11
T
, was isolated from a stool sample of a morbidly obese woman living in Marseille, France. This bacterium was characterized using biochemical, chemotaxonomic, and phylogenetic methods. The 16S rRNA gene sequence analysis showed that strain AT11
T
had a 97.8% nucleotide sequence similarity with
Eisenbergiella tayi
strain B086562
T
, the closest species with standing in nomenclature. The major cellular fatty acids of the novel isolate were C
16:0
followed by saturated or unsaturated C
18
fatty acids (C
18:1
n9, C
18:1
n5 and C
18:0)
. The draft genome of strain AT11
T
is 7,114,554 bp long with 48% G+C content. 6176 genes were predicted, including 6114 protein-coding genes and 62 were RNAs (with 2 5S rRNA genes, two 16S rRNA genes, two 23S rRNA genes, and 56 tRNA genes). The digital DNA–DNA hybridization (dDDH) relatedness between the new isolate and
E. tayi
strain B086562
T
was 23.1% ± 2.2. Based on the phenotypic, chemotaxonomic, genomic, and phylogenetic characteristics,
Eisenbergiella massiliensis
sp. nov., is proposed. The type strain is AT11
T
(= DSM 100838
T
= CSUR P2478
T
). |
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ISSN: | 0343-8651 1432-0991 |
DOI: | 10.1007/s00284-018-1520-2 |