Acetobacter oryzifermentans sp. nov., isolated from Korean traditional vinegar and reclassification of the type strains of Acetobacter pasteurianus subsp. ascendens (Henneberg 1898) and Acetobacter pasteurianus subsp. paradoxus (Frateur 1950) as Acetobacter ascendens sp. nov., comb. nov

Acetobacter oryzifermentans sp. nov., isolated from Korean traditional vinegar and reclassification of the type strains of Acetobacter pasteurianus subsp. ascendens (Henneberg 1898) and Acetobacter pasteurianus subsp. paradoxus (Frateur 1950) as Acetobacter ascendens sp. nov., comb. nov

Twelve Acetobacter pasteurianus-related strains with publicly available genomes in GenBank shared high 16S rRNA gene sequence similarity (>99.59%), but average nucleotide identity (ANI) and in silico DNA-DNA hybridization (DDH) values and multilocus sequence- and genome-based relatedness analyses...

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Veröffentlicht in:Systematic and applied microbiology 2018-07, Vol.41 (4), p.324-332
Hauptverfasser: Kim, Kyung Hyun, Cho, Ga Youn, Chun, Byung Hee, Weckx, Stefan, Moon, Ji Young, Yeo, Soo-Hwan, Jeon, Che Ok
Format: Artikel
Sprache:eng
Schlagworte:
Acetic Acid
Acetobacter - classification
Acetobacter - genetics
Acetobacter - isolation & purification
Acetobacter ascendens
Acetobacter oryzifermentans
Acetobacter pasteurianus
Bacterial Typing Techniques - methods
Base Composition
DNA, Bacterial - genetics
Fatty Acids - analysis
New taxa
Nucleic Acid Hybridization
Reclassification
RNA, Ribosomal, 16S - genetics
Sequence Analysis, DNA
Vinegar
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Zusammenfassung:Twelve Acetobacter pasteurianus-related strains with publicly available genomes in GenBank shared high 16S rRNA gene sequence similarity (>99.59%), but average nucleotide identity (ANI) and in silico DNA-DNA hybridization (DDH) values and multilocus sequence- and genome-based relatedness analyses suggested that they were divided into four different phylogenetic lineages. Relatedness analyses based on multilocus sequences, 1,194 core genes and whole-cell MALDI-TOF profiles supported that strains LMG 1590T and LMG 1591 (previously classified as the type strains of A. pasteurianus subsp. ascendens and paradoxus, respectively) and strain SLV-7T do not belong to A. pasteurianus. Strain SLV-7T, isolated from Korean traditional vinegar, shared low ANI (
ISSN:0723-2020
1618-0984
DOI:10.1016/j.syapm.2018.03.003