Genomic characterization and phylogenetic analysis of the novel Pseudomonas phage PPSC2
We isolated a Pseudomonas phage infecting Pseudomonas fluorescens SA1 separated from a soil sample collected in Sichuan Province, China. This phage, which we named PPSC2, has a genome that is composed of a 97,330-bp-long linear double-stranded DNA with 47.51% G+C content and 168 putative protein-cod...
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Veröffentlicht in: | Archives of virology 2018-07, Vol.163 (7), p.1977-1980 |
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Format: | Artikel |
Sprache: | eng |
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Zusammenfassung: | We isolated a
Pseudomonas
phage infecting
Pseudomonas fluorescens
SA1 separated from a soil sample collected in Sichuan Province, China. This phage, which we named PPSC2, has a genome that is composed of a 97,330-bp-long linear double-stranded DNA with 47.51% G+C content and 168 putative protein-coding genes. We identified 20 tRNA genes in the genome of PPSC2, and the tRNA GC content ranged from 44.2% to 58.4%. Phylogenetic and BLASTn analysis revealed that the
Pseudomonas
phage PPSC2 should be considered a new member of the family
Myoviridae
. |
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ISSN: | 0304-8608 1432-8798 |
DOI: | 10.1007/s00705-018-3801-2 |