Hymenobacter rivuli sp. nov., isolated from a freshwater creek
A bright-red bacterial strain, TAPP3 , was isolated from a freshwater sample taken from the Wanan Creek in Taiwan. Phylogenetic analyses based on 16S rRNA gene sequences revealed that TAPP3 represented a member of the genus Hymenobacter and showed the highest levels of sequence similarity to Hymenob...
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Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2018-04, Vol.68 (4), p.1220-1226 |
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Zusammenfassung: | A bright-red bacterial strain, TAPP3
, was isolated from a freshwater sample taken from the Wanan Creek in Taiwan. Phylogenetic analyses based on 16S rRNA gene sequences revealed that TAPP3
represented a member of the genus Hymenobacter and showed the highest levels of sequence similarity to Hymenobacter ginsengisoli DCY57
(97.0 %) and Hymenobacter marinus KJ035
(96.5 %) and less than 96.2 % with other members of the genus. Cells of TAPP3
were Gram-stain-negative, aerobic, motile by gliding, rods that were surrounded by a thick capsule. Growth occurred at 20-35 °C (optimum, 25-30 °C), at pH 6.5-7.5 (optimum, pH 7) and with 0-1 % NaCl (optimum, 0 %). TAPP3
contained iso-C15 : 0, summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c) and C16 : 1ω5c as the predominant fatty acids. The major isoprenoid quinone was MK-7. The polar lipid profile consisted of phosphatidylethanolamine, six uncharacterized aminophospholipids and four uncharacterized lipids. The major polyamine was homospermidine. The DNA G+C content of the genomic DNA was 62.8 mol%. The DNA-DNA relatedness of TAPP3
with respect to Hymenobacter ginsengisoli DCY57
was less than 40 %. On the basis of the phylogenetic inference and phenotypic data, TAPP3
should be classified as representing a novel species, for which the name Hymenobacter rivuli sp. nov. is proposed. The type strain is TAPP3
(=BCRC 80979
=LMG 29559
=KCTC 52236
). |
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ISSN: | 1466-5026 1466-5034 |
DOI: | 10.1099/ijsem.0.002657 |