Comparison of phytohormone levels and transcript profiles during seasonal dormancy transitions in underground adventitious buds of leafy spurge
Leafy spurge ( Euphorbia esula L.) is an herbaceous perennial weed that maintains its perennial growth habit through generation of underground adventitious buds (UABs) on the crown and lateral roots. These UABs undergo seasonal phases of dormancy under natural conditions, namely para-, endo-, and ec...
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| Veröffentlicht in: | Plant molecular biology 2017-06, Vol.94 (3), p.281-302 |
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| creator | Chao, Wun S. Doğramacı, Münevver Horvath, David P. Anderson, James V. Foley, Michael E. |
| description | Leafy spurge (
Euphorbia esula
L.) is an herbaceous perennial weed that maintains its perennial growth habit through generation of underground adventitious buds (UABs) on the crown and lateral roots. These UABs undergo seasonal phases of dormancy under natural conditions, namely para-, endo-, and ecodormancy in summer, fall, and winter, respectively. These dormancy phases can also be induced in growth chambers by manipulating photoperiod and temperature. In this study, UABs induced into the three phases of dormancy under controlled conditions were used to compare changes in phytohormone and transcriptome profiles. Results indicated that relatively high levels of ABA, the ABA metabolite PA, and IAA were found in paradormant buds. When UABs transitioned from para- to endodormancy, ABA and PA levels decreased, whereas IAA levels were maintained. Additionally, transcript profiles associated with regulation of soluble sugars and ethylene activities were also increased during para- to endodormancy transition, which may play some role in maintaining endodormancy status. When crown buds transitioned from endo- to ecodormancy, the ABA metabolites PA and DPA decreased significantly along with the down-regulation of ABA biosynthesis genes,
ABA2
and
NCED3
. IAA levels were also significantly lower in ecodormant buds than that of endodormant buds. We hypothesize that extended cold treatment may trigger physiological stress in endodormant buds, and that these stress-associated signals induced the endo- to ecodormancy transition and growth competence. The up-regulation of NAD/NADH phosphorylation and dephosphorylation pathway, and
MAF3
-like and
GRF
s genes, may be considered as markers of growth competency. |
| doi_str_mv | 10.1007/s11103-017-0607-7 |
| format | Article |
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Euphorbia esula
L.) is an herbaceous perennial weed that maintains its perennial growth habit through generation of underground adventitious buds (UABs) on the crown and lateral roots. These UABs undergo seasonal phases of dormancy under natural conditions, namely para-, endo-, and ecodormancy in summer, fall, and winter, respectively. These dormancy phases can also be induced in growth chambers by manipulating photoperiod and temperature. In this study, UABs induced into the three phases of dormancy under controlled conditions were used to compare changes in phytohormone and transcriptome profiles. Results indicated that relatively high levels of ABA, the ABA metabolite PA, and IAA were found in paradormant buds. When UABs transitioned from para- to endodormancy, ABA and PA levels decreased, whereas IAA levels were maintained. Additionally, transcript profiles associated with regulation of soluble sugars and ethylene activities were also increased during para- to endodormancy transition, which may play some role in maintaining endodormancy status. When crown buds transitioned from endo- to ecodormancy, the ABA metabolites PA and DPA decreased significantly along with the down-regulation of ABA biosynthesis genes,
ABA2
and
NCED3
. IAA levels were also significantly lower in ecodormant buds than that of endodormant buds. We hypothesize that extended cold treatment may trigger physiological stress in endodormant buds, and that these stress-associated signals induced the endo- to ecodormancy transition and growth competence. The up-regulation of NAD/NADH phosphorylation and dephosphorylation pathway, and
MAF3
-like and
GRF
s genes, may be considered as markers of growth competency.</description><identifier>ISSN: 0167-4412</identifier><identifier>EISSN: 1573-5028</identifier><identifier>DOI: 10.1007/s11103-017-0607-7</identifier><identifier>PMID: 28365837</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Abscisic acid ; Biochemistry ; Biomedical and Life Sciences ; Biosynthesis ; Buds ; Cold treatment ; Comparative studies ; Controlled conditions ; Dephosphorylation ; Dormancy ; Ethylene ; Euphorbia - physiology ; Flowers & plants ; Gene expression ; Gene Expression Regulation, Plant - physiology ; Gene regulation ; Genes ; Growth chambers ; Hormones ; Life Sciences ; Metabolites ; NAD ; NADH ; Phosphorylation ; Phytohormones ; Plant Dormancy - physiology ; Plant Growth Regulators - metabolism ; Plant hormones ; Plant Pathology ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Plant Sciences ; Seasons ; Stress (physiology) ; Sugar ; Temperature effects ; Transcription ; Transcriptome ; Trees</subject><ispartof>Plant molecular biology, 2017-06, Vol.94 (3), p.281-302</ispartof><rights>Springer Science+Business Media Dordrecht (outside the USA) 2017</rights><rights>Plant Molecular Biology is a copyright of Springer, 2017.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c372t-aa446792ec6362f0dce814ef10ba0100d836016ff6c295b1e9552892b3ef15f43</citedby><cites>FETCH-LOGICAL-c372t-aa446792ec6362f0dce814ef10ba0100d836016ff6c295b1e9552892b3ef15f43</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11103-017-0607-7$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11103-017-0607-7$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27923,27924,41487,42556,51318</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28365837$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chao, Wun S.</creatorcontrib><creatorcontrib>Doğramacı, Münevver</creatorcontrib><creatorcontrib>Horvath, David P.</creatorcontrib><creatorcontrib>Anderson, James V.</creatorcontrib><creatorcontrib>Foley, Michael E.</creatorcontrib><title>Comparison of phytohormone levels and transcript profiles during seasonal dormancy transitions in underground adventitious buds of leafy spurge</title><title>Plant molecular biology</title><addtitle>Plant Mol Biol</addtitle><addtitle>Plant Mol Biol</addtitle><description>Leafy spurge (
Euphorbia esula
L.) is an herbaceous perennial weed that maintains its perennial growth habit through generation of underground adventitious buds (UABs) on the crown and lateral roots. These UABs undergo seasonal phases of dormancy under natural conditions, namely para-, endo-, and ecodormancy in summer, fall, and winter, respectively. These dormancy phases can also be induced in growth chambers by manipulating photoperiod and temperature. In this study, UABs induced into the three phases of dormancy under controlled conditions were used to compare changes in phytohormone and transcriptome profiles. Results indicated that relatively high levels of ABA, the ABA metabolite PA, and IAA were found in paradormant buds. When UABs transitioned from para- to endodormancy, ABA and PA levels decreased, whereas IAA levels were maintained. Additionally, transcript profiles associated with regulation of soluble sugars and ethylene activities were also increased during para- to endodormancy transition, which may play some role in maintaining endodormancy status. When crown buds transitioned from endo- to ecodormancy, the ABA metabolites PA and DPA decreased significantly along with the down-regulation of ABA biosynthesis genes,
ABA2
and
NCED3
. IAA levels were also significantly lower in ecodormant buds than that of endodormant buds. We hypothesize that extended cold treatment may trigger physiological stress in endodormant buds, and that these stress-associated signals induced the endo- to ecodormancy transition and growth competence. The up-regulation of NAD/NADH phosphorylation and dephosphorylation pathway, and
MAF3
-like and
GRF
s genes, may be considered as markers of growth competency.</description><subject>Abscisic acid</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biosynthesis</subject><subject>Buds</subject><subject>Cold treatment</subject><subject>Comparative studies</subject><subject>Controlled conditions</subject><subject>Dephosphorylation</subject><subject>Dormancy</subject><subject>Ethylene</subject><subject>Euphorbia - physiology</subject><subject>Flowers & plants</subject><subject>Gene expression</subject><subject>Gene Expression Regulation, Plant - physiology</subject><subject>Gene regulation</subject><subject>Genes</subject><subject>Growth chambers</subject><subject>Hormones</subject><subject>Life Sciences</subject><subject>Metabolites</subject><subject>NAD</subject><subject>NADH</subject><subject>Phosphorylation</subject><subject>Phytohormones</subject><subject>Plant Dormancy - physiology</subject><subject>Plant Growth Regulators - metabolism</subject><subject>Plant hormones</subject><subject>Plant Pathology</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Plant Sciences</subject><subject>Seasons</subject><subject>Stress (physiology)</subject><subject>Sugar</subject><subject>Temperature effects</subject><subject>Transcription</subject><subject>Transcriptome</subject><subject>Trees</subject><issn>0167-4412</issn><issn>1573-5028</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNp1kc1u1TAQhS1ERS8tD8AGWWLDJtQ_Sews0RV_UiU2dG058fjWVWIHT1LpPgWvjKMUhJBYzcLfOeMzh5DXnL3njKkb5JwzWTGuKtYyValn5MAbJauGCf2cHBhvVVXXXFySl4gPjBWVbF-QS6Fl22ipDuTnMU2zzQFTpMnT-f68pPuUpxSBjvAII1IbHV2yjTjkMC90zsmHEZC6NYd4ogi2iO1IXZHZOJx3OCwhRaQh0jU6yKecyqTWPUJctrcVab863JaOYP2Z4rzmE1yTC29HhFdP84rcffr4_filuv32-evxw201SCWWytq6blUnYGhlKzxzA2heg-est1tKVwKW9N63g-iankPXNEJ3opeFaXwtr8i73bfE-bECLmYKOMA42gjlb4ZrLbXsRKcL-vYf9CGtuSQuVMcEqxvFN0O-U0NOiBm8mXOYbD4bzszWltnbMqUts7VlVNG8eXJe-wncH8XvegogdgDn7daQ_1r9X9df5paixw</recordid><startdate>20170601</startdate><enddate>20170601</enddate><creator>Chao, Wun S.</creator><creator>Doğramacı, Münevver</creator><creator>Horvath, David P.</creator><creator>Anderson, James V.</creator><creator>Foley, Michael E.</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20170601</creationdate><title>Comparison of phytohormone levels and transcript profiles during seasonal dormancy transitions in underground adventitious buds of leafy spurge</title><author>Chao, Wun S. ; Doğramacı, Münevver ; Horvath, David P. ; Anderson, James V. ; Foley, Michael E.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c372t-aa446792ec6362f0dce814ef10ba0100d836016ff6c295b1e9552892b3ef15f43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Abscisic acid</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biosynthesis</topic><topic>Buds</topic><topic>Cold treatment</topic><topic>Comparative studies</topic><topic>Controlled conditions</topic><topic>Dephosphorylation</topic><topic>Dormancy</topic><topic>Ethylene</topic><topic>Euphorbia - physiology</topic><topic>Flowers & plants</topic><topic>Gene expression</topic><topic>Gene Expression Regulation, Plant - physiology</topic><topic>Gene regulation</topic><topic>Genes</topic><topic>Growth chambers</topic><topic>Hormones</topic><topic>Life Sciences</topic><topic>Metabolites</topic><topic>NAD</topic><topic>NADH</topic><topic>Phosphorylation</topic><topic>Phytohormones</topic><topic>Plant Dormancy - physiology</topic><topic>Plant Growth Regulators - metabolism</topic><topic>Plant hormones</topic><topic>Plant Pathology</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Plant Sciences</topic><topic>Seasons</topic><topic>Stress (physiology)</topic><topic>Sugar</topic><topic>Temperature effects</topic><topic>Transcription</topic><topic>Transcriptome</topic><topic>Trees</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chao, Wun S.</creatorcontrib><creatorcontrib>Doğramacı, Münevver</creatorcontrib><creatorcontrib>Horvath, David P.</creatorcontrib><creatorcontrib>Anderson, James V.</creatorcontrib><creatorcontrib>Foley, Michael E.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Plant molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chao, Wun S.</au><au>Doğramacı, Münevver</au><au>Horvath, David P.</au><au>Anderson, James V.</au><au>Foley, Michael E.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Comparison of phytohormone levels and transcript profiles during seasonal dormancy transitions in underground adventitious buds of leafy spurge</atitle><jtitle>Plant molecular biology</jtitle><stitle>Plant Mol Biol</stitle><addtitle>Plant Mol Biol</addtitle><date>2017-06-01</date><risdate>2017</risdate><volume>94</volume><issue>3</issue><spage>281</spage><epage>302</epage><pages>281-302</pages><issn>0167-4412</issn><eissn>1573-5028</eissn><abstract>Leafy spurge (
Euphorbia esula
L.) is an herbaceous perennial weed that maintains its perennial growth habit through generation of underground adventitious buds (UABs) on the crown and lateral roots. These UABs undergo seasonal phases of dormancy under natural conditions, namely para-, endo-, and ecodormancy in summer, fall, and winter, respectively. These dormancy phases can also be induced in growth chambers by manipulating photoperiod and temperature. In this study, UABs induced into the three phases of dormancy under controlled conditions were used to compare changes in phytohormone and transcriptome profiles. Results indicated that relatively high levels of ABA, the ABA metabolite PA, and IAA were found in paradormant buds. When UABs transitioned from para- to endodormancy, ABA and PA levels decreased, whereas IAA levels were maintained. Additionally, transcript profiles associated with regulation of soluble sugars and ethylene activities were also increased during para- to endodormancy transition, which may play some role in maintaining endodormancy status. When crown buds transitioned from endo- to ecodormancy, the ABA metabolites PA and DPA decreased significantly along with the down-regulation of ABA biosynthesis genes,
ABA2
and
NCED3
. IAA levels were also significantly lower in ecodormant buds than that of endodormant buds. We hypothesize that extended cold treatment may trigger physiological stress in endodormant buds, and that these stress-associated signals induced the endo- to ecodormancy transition and growth competence. The up-regulation of NAD/NADH phosphorylation and dephosphorylation pathway, and
MAF3
-like and
GRF
s genes, may be considered as markers of growth competency.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>28365837</pmid><doi>10.1007/s11103-017-0607-7</doi><tpages>22</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0167-4412 |
| ispartof | Plant molecular biology, 2017-06, Vol.94 (3), p.281-302 |
| issn | 0167-4412 1573-5028 |
| language | eng |
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| source | MEDLINE; SpringerLink Journals - AutoHoldings |
| subjects | Abscisic acid Biochemistry Biomedical and Life Sciences Biosynthesis Buds Cold treatment Comparative studies Controlled conditions Dephosphorylation Dormancy Ethylene Euphorbia - physiology Flowers & plants Gene expression Gene Expression Regulation, Plant - physiology Gene regulation Genes Growth chambers Hormones Life Sciences Metabolites NAD NADH Phosphorylation Phytohormones Plant Dormancy - physiology Plant Growth Regulators - metabolism Plant hormones Plant Pathology Plant Proteins - genetics Plant Proteins - metabolism Plant Sciences Seasons Stress (physiology) Sugar Temperature effects Transcription Transcriptome Trees |
| title | Comparison of phytohormone levels and transcript profiles during seasonal dormancy transitions in underground adventitious buds of leafy spurge |
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