CloudPhylo: a fast and scalable tool for phylogeny reconstruction
Phylogeny reconstruction is fundamentally crucial for molecular evolutionary studies but remains computationally challenging. Here we present CloudPhylo, a tool built on Spark that is capable of processing large-scale datasets for phylogeny reconstruction. As testified on empirical data, CloudPhylo...
Gespeichert in:
Veröffentlicht in: | Bioinformatics (Oxford, England) England), 2017-02, Vol.33 (3), p.438-440 |
---|---|
Hauptverfasser: | , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
Zusammenfassung: | Phylogeny reconstruction is fundamentally crucial for molecular evolutionary studies but remains computationally challenging. Here we present CloudPhylo, a tool built on Spark that is capable of processing large-scale datasets for phylogeny reconstruction. As testified on empirical data, CloudPhylo is well suited for big data analysis, achieving high efficiency and good scalability on phylogenetic tree inference.
https://github.com/XingjianXu/cloudphylo
zhangzhang@big.ac.cn
Supplementary data are available at Bioinformatics online. |
---|---|
ISSN: | 1367-4803 1367-4811 |
DOI: | 10.1093/bioinformatics/btw645 |