Determining the effect of acid stress on the persistence and growth of thermophilic microbial species after mesophilic colonisation of low grade ore in a heap leach environment

•After colonising at 25°C and heating to 50°C, bioleach columns of pH 1.2–1.7 maintained Eh>800mV.•After colonising at 25°C and heating to 50°C, Eh of pH 1.0 column fell below 700mV without recovery.•All columns at pH 1.2 and higher achieved Eh values above 800mV after a temperature increase to 60°C.•Initial low temperature negatively affected persistence of the thermophilic micro-organisms.•Biomass on ore was reduced 5–15 and 25–100 fold at pH 1.4 and 1.2 respectively compared to pH 1.5–1.7. The microorganisms involved in the bioleaching of sulphidic mineral ores are acidophilic. Generally, a pH in the range of pH 1–2.5 is applied for optimal growth in these systems. In operating heaps, perturbation of conditions could result in changes in the pH outside this “safe” window, so an understanding of the effect of changes in pH on growth and activity of bioleaching microbes is needed. Previous work has shown that some microorganisms e.g. Acidithiobacillus thiooxidans, Leptospirillum ferriphilum and Leptospirillum ferrooxidans are able to adapt to low pH environments (∼pH 0.9). However, most studies on the response of micro-organisms implicated in mineral bioleaching to pH have been conducted under submerged, aerated culture conditions, with limited performance-based studies conducted under conditions mimicking a heap environment. In this study, the effect of acid stress on the persistence of the thermophilic micro-organisms in the ore bed inoculated at mesophilic conditions and their subsequent growth on reaching thermophilic conditions is considered. Following inoculation, five columns loaded with a low grade chalcopyrite ore were irrigated at a feed pH of 1.7 at 25°C. After a few days, the temperature was sequentially increased from 25°C through 37°C to 50°C, resulting in an Eh above 850mV across all columns. The irrigation feed pH was then varied across the range pH 1.0 to 1.7 at 50°C. Eh values greater than 800mV could be attained in the columns with feed pH values between pH 1.2 and pH 1.7 at 50°C. The Eh of the column receiving feed solution at a pH of 1.0 at 50°C dropped to below 700mV and did not recover. The temperature was then increased gradually to 60°C. All the columns with feed pH of 1.2 and higher achieved Eh values above 800mV. Quantitative analyses of the microbial community on selected PLS and ore samples indicated that lower pH affected the persistence of the thermophilic micro-organisms in the ore bed and their subsequent growth on reachin