Epidemiological and molecular features of hepatitis B and hepatitis delta virus transmission in a remote rural community in central Africa

Hepatitis B virus (HBV) and hepatitis delta virus (HDV) occur worldwide and are prevalent in both urban and remote rural communities. In a remote village in Gabon, central Africa, we observed a high prevalence of HBsAg carriage and HDV infection, particularly in children and adolescents. The prevalence of HBsAg differed significantly by gender and age, females being more likely than males to carry the HBsAg during the first 10years of life, while the prevalence was higher among males than females aged 11–20years. We also characterised HBV and HDV strains circulating in the village. The principal HBV strains belonged to genotype HBV-E and subgenotype QS-A3. Complete genome analysis revealed for the first time the presence of the HBV-D genotype in Gabon, in the form of an HBV-D/E recombinant. Molecular analysis of HDV strains and their complete genomic characterisation revealed two distinct groups within the dominant HDV clade 8. Molecular analysis of HBV and HDV strains did not reveal vertical transmission within the families studied but rather horizontal, intrafamilial transmission among children aged 0–10years. Our findings indicate that HBV is transmitted in early childhood by body fluids rather than by sexual contact. Health education adapted to the different age groups might therefore help to reduce HBV transmission. Young children should be vaccinated to control HBV infection in areas of extremely high prevalence. •High prevalence of HBsAg carriage and HDV was found in a remote village in Gabon and the prevalence of HBsAg differed by gender and age.•The main HBV strains belonged to genotype HBV-E and subgenotype QS-A3.•Complete genome analysis revealed for the first time the presence of the HBV-D genotype in Gabon, in the form of an HBV-D/E recombinant.•Complete genomic characterisation of HDV strains revealed two distinct groups within the dominant HDV clade 8.•We observed horizontal, intrafamilial transmission of HBV and HDV among children aged 0–10years.