Bioinformatics aided microbial approach for bioremediation of wastewater containing textile dyes

Four textile azo dyes, Joyfix Red, Remazol Red, Reactive Red and Reactive Yellow, were studied for decolorization. Of nineteen soil bacterial isolates, two novel strains were found to highly decolorize Joyfix Red and were identified as Lysinibacillus sphaericus (KF032717) and Aeromonas hydrophila (KF032718) through 16S rDNA analysis. Laccase and Azoreductase enzyme modeling and enzyme–dye interaction performed using Schrödinger Suite imitated decolorization percentage. Results based on cumulative Glide score (Dry laboratory) and decolorization percentage of the other three dyes based on ultraviolet–visible (UV–vis) spectroscopy (Wet laboratory) were reliable. Biodegradation of Joyfix Red was confirmed by high-performance liquid chromatography (HPTLC) elution profile which showed four peaks at 1.522, 1.800, 3.068 and 3.804min with that of parent dye which showed single peak at 1.472min. Fourier transform infrared spectroscopy (FT-IR) analysis supported the biotransformation of Joyfix Red. Gas chromatography–mass spectroscopy (GC–MS) analysis showed sodium (3E,5Z)-4-amino-6-hydroxyhexa-13,5-triene-2-sulfonate was formed as end product during biodegradation. From these findings, it can be inferred that enzyme and dye interaction studies can assist in examining decolorization efficiency of bacteria and its enzyme, thereby enhancing the bioremediation process by reducing preliminary lengthy wet laboratory screening. This is the first report of a combinatorial in silico cum in vitro approach and its validation for the bioremediation of wastewater containing these textile azo dyes. •A first report on a combined in silico and in vitro approach for decolorization of textile azo dyes.•Molecular docking of dyes with bacterial enzymes was compared with wet-lab studies (decolorization/ degradation profile).•Spectroscopic and molecular docking analysis was in good agreement.•Extracted metabolites confirmed biodegradation of the dyes by the novel bacterial isolate Aeromonas hydrophila SK16.•A possible biodegradative pathway is also elucidated through UV- spectroscopy, FT-IR, HPLC and GC-MS analysis.• The proposed in silico approach can eliminate laborious preliminary screening of analyzing the decolorization percentages.