Selenocysteine oxidation in glutathione peroxidase catalysis: an MS-supported quantum mechanics study

Glutathione peroxidases (GPxs) are enzymes working with either selenium or sulfur catalysis. They adopted diverse functions ranging from detoxification of H2O2 to redox signaling and differentiation. The relative stability of the selenoenzymes, however, remained enigmatic in view of the postulated involvement of a highly unstable selenenic acid form during catalysis. Nevertheless, density functional theory calculations obtained with a representative active site model verify the mechanistic concept of GPx catalysis and underscore its efficiency. However, they also allow that the selenenic acid, in the absence of the reducing substrate, reacts with a nitrogen in the active site. MS/MS analysis of oxidized rat GPx4 complies with the predicted structure, an 8-membered ring, in which selenium is bound as selenenylamide to the protein backbone. The intermediate can be re-integrated into the canonical GPx cycle by glutathione, whereas, under denaturing conditions, its selenium moiety undergoes β-cleavage with formation of a dehydro-alanine residue. The selenenylamide bypass prevents destruction of the redox center due to over-oxidation of the selenium or its elimination and likely allows fine-tuning of GPx activity or alternate substrate reactions for regulatory purposes. DFT-based cartoon demonstrating the reversible formation of a covalent bond between selenium, the element of the moon (red ball), with a downstream peptide nitrogen (blue ball) in the active site of oxidized glutathione peroxidases. [Display omitted] •DFT calculations corroborate the catalytic cycle of GSH peroxidases.•In oxidized GSH peroxidases the Se moiety is stabilized as Se-N bond.•Thiolysis of the Se-N bond re-integrates the enzyme into the canonical cycle.•Upon denaturation Se-N-involved Sec loses Se to form dehydroalanine.•The Se-N bypass of GPx catalysis implies new perspectives of redox regulation.