Low-temperature bacterial viruses VR – a small but diverse group of E. coli phages

The complete genome sequences of four low-temperature Escherichia coli -specific tevenviruses, vb_EcoM-VR5, vb_EcoM-VR20, vb_EcoM-VR25 and vb_EcoM-VR26, were determined. Genomic comparisons including recently described genomes of vb_EcoM-VR7 and JS98 as well as phage T4 allowed the identification of...

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Veröffentlicht in:Archives of virology 2015-05, Vol.160 (5), p.1367-1370
Hauptverfasser: Kaliniene, Laura, Zajančkauskaitė, Aurelija, Šimoliūnas, Eugenijus, Truncaitė, Lidija, Meškys, Rolandas
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Sprache:eng
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Zusammenfassung:The complete genome sequences of four low-temperature Escherichia coli -specific tevenviruses, vb_EcoM-VR5, vb_EcoM-VR20, vb_EcoM-VR25 and vb_EcoM-VR26, were determined. Genomic comparisons including recently described genomes of vb_EcoM-VR7 and JS98 as well as phage T4 allowed the identification of two genetic groups that were consistent with defined host-range phenotypes. Group A included the broad-host-range phages vb_EcoM-VR5 and JS98, while group B included vb_EcoM-VR7, vb_EcoM-VR20, vb_EcoM-VR25 and vb_EcoM-VR26, which all had somewhat limited host ranges. All four sequenced phages had genomes that were similar in length (~170 kb) and GC content (~40 %), and, with the exception of vb_EcoM-VR5, at the nucleotide level, they were much more closely related to each other than either was to any other tevenvirus currently characterized. Nevertheless, the overall genome organization of vb_EcoM-VR5, vb_EcoM-VR20, vb_EcoM-VR25 and vb_EcoM-VR26 was comparable to that seen in tevenviruses.
ISSN:0304-8608
1432-8798
DOI:10.1007/s00705-015-2388-0