Approximate string matching with stuck address bits

A string S ∈ Σ m can be viewed as a set of pairs { ( s i , i ) ∣ s i ∈ S , i ∈ { 0 , … , m − 1 } } . We follow the recent work on pattern matching with address errors and consider approximate pattern matching problems arising from the setting where errors are introduced to the location component ( i...

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Veröffentlicht in:Theoretical computer science 2011-07, Vol.412 (29), p.3537-3544
Hauptverfasser: Amir, Amihood, Eisenberg, Estrella, Keller, Orgad, Levy, Avivit, Porat, Ely
Format: Artikel
Sprache:eng
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Zusammenfassung:A string S ∈ Σ m can be viewed as a set of pairs { ( s i , i ) ∣ s i ∈ S , i ∈ { 0 , … , m − 1 } } . We follow the recent work on pattern matching with address errors and consider approximate pattern matching problems arising from the setting where errors are introduced to the location component ( i ), rather than the more traditional setting, where errors are introduced to the content itself ( s i ). Specifically, we continue the work on string matching in the presence of address bit errors. In this paper, we consider the case where bits of i may be stuck, either in a consistent or transient manner. We formally define the corresponding approximate pattern matching problems, and provide efficient algorithms for their resolution.
ISSN:0304-3975
1879-2294
DOI:10.1016/j.tcs.2011.02.044