Fourteen Polymorphic Microsatellite Markers for the Threatened Arnica montana (Asteraceae)

Premise of the study: Microsatellite markers were developed to investigate population genetic structure in the threatened species Arnica montana. Methods and Results: Fourteen microsatellite markers with di-, tetra-, and hexanucleotide repeat motifs were developed for A. montana using 454 pyrosequen...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Applications in plant sciences 2015-01, Vol.3 (1), p.n/a
Hauptverfasser: Duwe, Virginia K, Ismail, Sascha A, Buser, Andres, Sossai, Esther, Borsch, Thomas, Muller, Ludo A. H
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Beschreibung
Zusammenfassung:Premise of the study: Microsatellite markers were developed to investigate population genetic structure in the threatened species Arnica montana. Methods and Results: Fourteen microsatellite markers with di-, tetra-, and hexanucleotide repeat motifs were developed for A. montana using 454 pyrosequencing without and with library-enrichment methods, resulting in 56,545 sequence reads and 14,467 sequence reads, respectively. All loci showed a high level of polymorphism, with allele numbers ranging from four to 11 in five individuals from five populations (25 samples) and an expected heterozygosity ranging from 0.192 to 0.648 across the loci. Conclusions: This set of microsatellite markers is the first one described for A. montana and will facilitate conservation genetic applications as well as the understanding of phylogeographic patterns in this species.
ISSN:2168-0450
2168-0450
DOI:10.3732/apps.1400091