A database of mutants and effects of site-directed mutagenesis experiments on G protein-coupled receptors
A database system and computer programs for storage and retrieval of information about guanine nucleotide‐binding protein (G protein) ‐coupled receptor mutants and associated biological effects have been developed. Mutation data on the receptors were collected from the literature and a database of m...
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Veröffentlicht in: | Proteins, structure, function, and bioinformatics structure, function, and bioinformatics, 1996-09, Vol.26 (1), p.81-94 |
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creator | Kristiansen, Kurt Dahl, Svein G. Edvardsen, Øyvind |
description | A database system and computer programs for storage and retrieval of information about guanine nucleotide‐binding protein (G protein) ‐coupled receptor mutants and associated biological effects have been developed. Mutation data on the receptors were collected from the literature and a database of mutants and effects of mutations was developed. The G protein‐coupled receptor, family A, point mutation database (GRAP) provides detailed information on ligand‐binding and signal transduction properties of more than 2130 receptor mutants. The amino acid sequences of receptors for which mutation experiments have been reported were aligned, and from this alignment mutation data may be retrieved. Alternatively, a search form allowing detailed specification of which mutants to retrieve may be used, for example, to search for specific amino acid substitutions, substitutions in specific protein domains or reported biological effects. Furthermore, ligand and bibliographic oriented queries may be performed. GRAP is available on the Internet (URL: http://www‐grap.fagmed.uit.no/GRAP/homepage.html) using the World‐Wide Web system. © 1996 Wiley‐Liss, Inc. |
doi_str_mv | 10.1002/(SICI)1097-0134(199609)26:1<81::AID-PROT8>3.0.CO;2-J |
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Mutation data on the receptors were collected from the literature and a database of mutants and effects of mutations was developed. The G protein‐coupled receptor, family A, point mutation database (GRAP) provides detailed information on ligand‐binding and signal transduction properties of more than 2130 receptor mutants. The amino acid sequences of receptors for which mutation experiments have been reported were aligned, and from this alignment mutation data may be retrieved. Alternatively, a search form allowing detailed specification of which mutants to retrieve may be used, for example, to search for specific amino acid substitutions, substitutions in specific protein domains or reported biological effects. Furthermore, ligand and bibliographic oriented queries may be performed. 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GRAP is available on the Internet (URL: http://www‐grap.fagmed.uit.no/GRAP/homepage.html) using the World‐Wide Web system. © 1996 Wiley‐Liss, Inc.</description><subject>Amino Acid Sequence</subject><subject>Computer Communication Networks</subject><subject>Computers</subject><subject>G protein-coupled receptors</subject><subject>GTP-Binding Proteins - metabolism</subject><subject>information storage and retrieval</subject><subject>Information Systems - statistics & numerical data</subject><subject>Internet</subject><subject>ligand-receptor interactions</subject><subject>Molecular Sequence Data</subject><subject>Mutagenesis, Site-Directed - genetics</subject><subject>Mutation - genetics</subject><subject>Receptors, Cell Surface - classification</subject><subject>Receptors, Cell Surface - metabolism</subject><subject>Sequence Alignment</subject><subject>signal transduction</subject><subject>Site-directed mutagenesis</subject><subject>software</subject><subject>World-Wide Web</subject><issn>0887-3585</issn><issn>1097-0134</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1996</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9UcGO0zAQtRBoKQufgJQT2j2kjOPEscsKqcpCaVUoWorgNnKSCQqkSYgT7e7f42yqXkD4Ys_ozXue9xi74jDnAMHriy_rZH3JQcc-cBFecK0l6MtALviV4ovFcn3tf77Z7dVbMYd5snsT-JtHbHYaeMxmoFTsi0hFT9kza38CgNRCnrEzpRRoEcxYufRy05vUWPKawjsMval765k696goKHNv17ZlT35edq6m_AH0g2qypfXorqWuPNA41NTeymu7pqey9rNmaCsHdjPU9k1nn7MnhaksvTje5-zr-3f75IO_3a3WyXLrZxFI5cswC407OlBhDHEoMi10AEKnGSkTciDIMgCVRlxBbnJdaJVHUsqiKPJQpeKcvZp43U9-D2R7PJQ2o6oyNTWDRR4pzgOtHHA_AbOusbajAlu3ienukQOOCSCOCeBoKI6G4pQABhI5Ko7oEsCHBFAgYLLDADeO9uVRf0gPlJ9Ij5aL0963ZUX3f2n-X_JfilPD8foTb2l7ujvxmu4XyljEEX77tMLN95hvtfyIN-IPC-yxuA</recordid><startdate>199609</startdate><enddate>199609</enddate><creator>Kristiansen, Kurt</creator><creator>Dahl, Svein G.</creator><creator>Edvardsen, Øyvind</creator><general>Wiley Subscription Services, Inc., A Wiley Company</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope></search><sort><creationdate>199609</creationdate><title>A database of mutants and effects of site-directed mutagenesis experiments on G protein-coupled receptors</title><author>Kristiansen, Kurt ; Dahl, Svein G. ; Edvardsen, Øyvind</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5068-64c4aaaa928470743c9392039bce8a410e0cc008b5180dad9f98d5666fffd48b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1996</creationdate><topic>Amino Acid Sequence</topic><topic>Computer Communication Networks</topic><topic>Computers</topic><topic>G protein-coupled receptors</topic><topic>GTP-Binding Proteins - metabolism</topic><topic>information storage and retrieval</topic><topic>Information Systems - statistics & numerical data</topic><topic>Internet</topic><topic>ligand-receptor interactions</topic><topic>Molecular Sequence Data</topic><topic>Mutagenesis, Site-Directed - genetics</topic><topic>Mutation - genetics</topic><topic>Receptors, Cell Surface - classification</topic><topic>Receptors, Cell Surface - metabolism</topic><topic>Sequence Alignment</topic><topic>signal transduction</topic><topic>Site-directed mutagenesis</topic><topic>software</topic><topic>World-Wide Web</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kristiansen, Kurt</creatorcontrib><creatorcontrib>Dahl, Svein G.</creatorcontrib><creatorcontrib>Edvardsen, Øyvind</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><jtitle>Proteins, structure, function, and bioinformatics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kristiansen, Kurt</au><au>Dahl, Svein G.</au><au>Edvardsen, Øyvind</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A database of mutants and effects of site-directed mutagenesis experiments on G protein-coupled receptors</atitle><jtitle>Proteins, structure, function, and bioinformatics</jtitle><addtitle>Proteins</addtitle><date>1996-09</date><risdate>1996</risdate><volume>26</volume><issue>1</issue><spage>81</spage><epage>94</epage><pages>81-94</pages><issn>0887-3585</issn><eissn>1097-0134</eissn><abstract>A database system and computer programs for storage and retrieval of information about guanine nucleotide‐binding protein (G protein) ‐coupled receptor mutants and associated biological effects have been developed. Mutation data on the receptors were collected from the literature and a database of mutants and effects of mutations was developed. The G protein‐coupled receptor, family A, point mutation database (GRAP) provides detailed information on ligand‐binding and signal transduction properties of more than 2130 receptor mutants. The amino acid sequences of receptors for which mutation experiments have been reported were aligned, and from this alignment mutation data may be retrieved. Alternatively, a search form allowing detailed specification of which mutants to retrieve may be used, for example, to search for specific amino acid substitutions, substitutions in specific protein domains or reported biological effects. Furthermore, ligand and bibliographic oriented queries may be performed. 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subjects | Amino Acid Sequence Computer Communication Networks Computers G protein-coupled receptors GTP-Binding Proteins - metabolism information storage and retrieval Information Systems - statistics & numerical data Internet ligand-receptor interactions Molecular Sequence Data Mutagenesis, Site-Directed - genetics Mutation - genetics Receptors, Cell Surface - classification Receptors, Cell Surface - metabolism Sequence Alignment signal transduction Site-directed mutagenesis software World-Wide Web |
title | A database of mutants and effects of site-directed mutagenesis experiments on G protein-coupled receptors |
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