In silico analysis of the regulatory region of the Yellowtail Kingfish and Zebrafish Kiss and Kiss receptor genes
We have cloned and analysed the partial putative promoter sequences of the Yellowtail Kingfish ( Seriola lalandi ) Kiss2 and Kiss2r genes (380 and 420 bp, respectively). We obtained in silico 1.5 kb of the zebrafish ( Danio rerio ) Kiss1, Kiss2, Kiss1r and zf Kiss2r sequences upstream of the putativ...
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| Veröffentlicht in: | Fish physiology and biochemistry 2013-02, Vol.39 (1), p.59-63 |
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| creator | Nocillado, J. N. Mechaly, A. S. Elizur, A. |
| description | We have cloned and analysed the partial putative promoter sequences of the Yellowtail Kingfish (
Seriola lalandi
)
Kiss2
and
Kiss2r
genes (380 and 420 bp, respectively). We obtained in silico 1.5 kb of the zebrafish (
Danio rerio
)
Kiss1,
Kiss2,
Kiss1r
and zf
Kiss2r
sequences upstream of the putative transcriptional initiation site. Bioinformatic analysis revealed promoter regulatory elements including AP-1, Sp1, GR, ER, PR, AR, GATA-1, TTF-1, YY1 and C/EBP. These regulatory elements may mediate novel roles of the
Kiss
genes and their receptors in addition to their established role in reproductive function. |
| doi_str_mv | 10.1007/s10695-012-9642-0 |
| format | Article |
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Seriola lalandi
)
Kiss2
and
Kiss2r
genes (380 and 420 bp, respectively). We obtained in silico 1.5 kb of the zebrafish (
Danio rerio
)
Kiss1,
Kiss2,
Kiss1r
and zf
Kiss2r
sequences upstream of the putative transcriptional initiation site. Bioinformatic analysis revealed promoter regulatory elements including AP-1, Sp1, GR, ER, PR, AR, GATA-1, TTF-1, YY1 and C/EBP. These regulatory elements may mediate novel roles of the
Kiss
genes and their receptors in addition to their established role in reproductive function.</description><identifier>ISSN: 0920-1742</identifier><identifier>EISSN: 1573-5168</identifier><identifier>DOI: 10.1007/s10695-012-9642-0</identifier><identifier>PMID: 22527613</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Animal Anatomy ; Animal Biochemistry ; Animal Physiology ; Animals ; Base Sequence ; Binding sites ; Biomedical and Life Sciences ; Chromosomes ; Cloning, Molecular ; Computational Biology ; Danio rerio ; DNA Primers - genetics ; Freshwater ; Freshwater & Marine Ecology ; Genes ; Genomes ; Histology ; Kisspeptins - genetics ; Life Sciences ; Marine ; Molecular Sequence Data ; Morphology ; Perciformes - genetics ; Polymerase Chain Reaction ; Receptors, G-Protein-Coupled - genetics ; Regulatory Elements, Transcriptional - genetics ; Sequence Analysis, DNA ; Seriola lalandi ; Transcription factors ; Vertebrates ; Zebrafish - genetics ; Zoology</subject><ispartof>Fish physiology and biochemistry, 2013-02, Vol.39 (1), p.59-63</ispartof><rights>Springer Science+Business Media B.V. 2012</rights><rights>Springer Science+Business Media Dordrecht 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c471t-fb50ca8b9998b8cce3f9ffb69245bd36f7dde28c79001c96bd97758918f02cb23</citedby><cites>FETCH-LOGICAL-c471t-fb50ca8b9998b8cce3f9ffb69245bd36f7dde28c79001c96bd97758918f02cb23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10695-012-9642-0$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10695-012-9642-0$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,777,781,27905,27906,41469,42538,51300</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22527613$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nocillado, J. N.</creatorcontrib><creatorcontrib>Mechaly, A. S.</creatorcontrib><creatorcontrib>Elizur, A.</creatorcontrib><title>In silico analysis of the regulatory region of the Yellowtail Kingfish and Zebrafish Kiss and Kiss receptor genes</title><title>Fish physiology and biochemistry</title><addtitle>Fish Physiol Biochem</addtitle><addtitle>Fish Physiol Biochem</addtitle><description>We have cloned and analysed the partial putative promoter sequences of the Yellowtail Kingfish (
Seriola lalandi
)
Kiss2
and
Kiss2r
genes (380 and 420 bp, respectively). We obtained in silico 1.5 kb of the zebrafish (
Danio rerio
)
Kiss1,
Kiss2,
Kiss1r
and zf
Kiss2r
sequences upstream of the putative transcriptional initiation site. Bioinformatic analysis revealed promoter regulatory elements including AP-1, Sp1, GR, ER, PR, AR, GATA-1, TTF-1, YY1 and C/EBP. These regulatory elements may mediate novel roles of the
Kiss
genes and their receptors in addition to their established role in reproductive function.</description><subject>Animal Anatomy</subject><subject>Animal Biochemistry</subject><subject>Animal Physiology</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Binding sites</subject><subject>Biomedical and Life Sciences</subject><subject>Chromosomes</subject><subject>Cloning, Molecular</subject><subject>Computational Biology</subject><subject>Danio rerio</subject><subject>DNA Primers - genetics</subject><subject>Freshwater</subject><subject>Freshwater & Marine Ecology</subject><subject>Genes</subject><subject>Genomes</subject><subject>Histology</subject><subject>Kisspeptins - genetics</subject><subject>Life Sciences</subject><subject>Marine</subject><subject>Molecular Sequence Data</subject><subject>Morphology</subject><subject>Perciformes - genetics</subject><subject>Polymerase Chain Reaction</subject><subject>Receptors, G-Protein-Coupled - genetics</subject><subject>Regulatory Elements, Transcriptional - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Seriola lalandi</subject><subject>Transcription factors</subject><subject>Vertebrates</subject><subject>Zebrafish - genetics</subject><subject>Zoology</subject><issn>0920-1742</issn><issn>1573-5168</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkUFv1DAQhS1ERZfCD-CCInHhEpgZJ3F8RBWFqpW4lANcLNuxt66y8dZOhPbf17vbIoSExMnPnu89W36MvUH4gADiY0boZFsDUi27hmp4xlbYCl632PXP2QokQY2ioVP2Muc7AJCiwxfslKiloviK3V9OVQ5jsLHSkx53OeQq-mq-dVVy62XUc0y7vQxxehr8cOMYf806jNVVmNY-5NtiHqqfziR92F2FnA9HB5GcdduSU63d5PIrduL1mN3rx_WMfb_4fHP-tb7-9uXy_NN1bRuBc-1NC1b3RkrZm95ax7303nSSmtYMvPNiGBz1VkgAtLIzgxSi7SX2Hsga4mfs_TF3m-L94vKsNiHb8nQ9ubhkhSSxI5TU_gcqeMORaJ_67i_0Li6p_NyBAs5J9KJQeKRsijkn59U2hY1OO4Wg9tWpY3WqVKf21SkonrePyYvZuOG346mrAtARyGU0rV364-p_pj4AlJKjqQ</recordid><startdate>20130201</startdate><enddate>20130201</enddate><creator>Nocillado, J. 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N. ; Mechaly, A. S. ; Elizur, A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c471t-fb50ca8b9998b8cce3f9ffb69245bd36f7dde28c79001c96bd97758918f02cb23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Animal Anatomy</topic><topic>Animal Biochemistry</topic><topic>Animal Physiology</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Binding sites</topic><topic>Biomedical and Life Sciences</topic><topic>Chromosomes</topic><topic>Cloning, Molecular</topic><topic>Computational Biology</topic><topic>Danio rerio</topic><topic>DNA Primers - genetics</topic><topic>Freshwater</topic><topic>Freshwater & Marine Ecology</topic><topic>Genes</topic><topic>Genomes</topic><topic>Histology</topic><topic>Kisspeptins - genetics</topic><topic>Life Sciences</topic><topic>Marine</topic><topic>Molecular Sequence Data</topic><topic>Morphology</topic><topic>Perciformes - genetics</topic><topic>Polymerase Chain Reaction</topic><topic>Receptors, G-Protein-Coupled - genetics</topic><topic>Regulatory Elements, Transcriptional - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Seriola lalandi</topic><topic>Transcription factors</topic><topic>Vertebrates</topic><topic>Zebrafish - genetics</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nocillado, J. N.</creatorcontrib><creatorcontrib>Mechaly, A. 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N.</au><au>Mechaly, A. S.</au><au>Elizur, A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>In silico analysis of the regulatory region of the Yellowtail Kingfish and Zebrafish Kiss and Kiss receptor genes</atitle><jtitle>Fish physiology and biochemistry</jtitle><stitle>Fish Physiol Biochem</stitle><addtitle>Fish Physiol Biochem</addtitle><date>2013-02-01</date><risdate>2013</risdate><volume>39</volume><issue>1</issue><spage>59</spage><epage>63</epage><pages>59-63</pages><issn>0920-1742</issn><eissn>1573-5168</eissn><abstract>We have cloned and analysed the partial putative promoter sequences of the Yellowtail Kingfish (
Seriola lalandi
)
Kiss2
and
Kiss2r
genes (380 and 420 bp, respectively). We obtained in silico 1.5 kb of the zebrafish (
Danio rerio
)
Kiss1,
Kiss2,
Kiss1r
and zf
Kiss2r
sequences upstream of the putative transcriptional initiation site. Bioinformatic analysis revealed promoter regulatory elements including AP-1, Sp1, GR, ER, PR, AR, GATA-1, TTF-1, YY1 and C/EBP. These regulatory elements may mediate novel roles of the
Kiss
genes and their receptors in addition to their established role in reproductive function.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>22527613</pmid><doi>10.1007/s10695-012-9642-0</doi><tpages>5</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0920-1742 |
| ispartof | Fish physiology and biochemistry, 2013-02, Vol.39 (1), p.59-63 |
| issn | 0920-1742 1573-5168 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_1291621925 |
| source | MEDLINE; Springer Nature - Complete Springer Journals |
| subjects | Animal Anatomy Animal Biochemistry Animal Physiology Animals Base Sequence Binding sites Biomedical and Life Sciences Chromosomes Cloning, Molecular Computational Biology Danio rerio DNA Primers - genetics Freshwater Freshwater & Marine Ecology Genes Genomes Histology Kisspeptins - genetics Life Sciences Marine Molecular Sequence Data Morphology Perciformes - genetics Polymerase Chain Reaction Receptors, G-Protein-Coupled - genetics Regulatory Elements, Transcriptional - genetics Sequence Analysis, DNA Seriola lalandi Transcription factors Vertebrates Zebrafish - genetics Zoology |
| title | In silico analysis of the regulatory region of the Yellowtail Kingfish and Zebrafish Kiss and Kiss receptor genes |
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