Recognition of DNA gene fragments using hidden Markov models

A model of the recognition of functional sites of genes in DNA on the basis of hidden Markov models is considered. It is shown how algorithms based on Markov chain models of various orders can be used to detect fragments of genes of three genomes of higher organisms.

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Veröffentlicht in:Cybernetics and systems analysis 2012-05, Vol.48 (3), p.369-377
Hauptverfasser: Sergienko, I. V., Gupal, A. M., Ostrovsky, A. V.
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container_title Cybernetics and systems analysis
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creator Sergienko, I. V.
Gupal, A. M.
Ostrovsky, A. V.
description A model of the recognition of functional sites of genes in DNA on the basis of hidden Markov models is considered. It is shown how algorithms based on Markov chain models of various orders can be used to detect fragments of genes of three genomes of higher organisms.
doi_str_mv 10.1007/s10559-012-9416-9
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subjects Algorithms
Analysis
Artificial Intelligence
Control
Cybernetics
Deoxyribonucleic acid
DNA
Genes
Genomes
Genomics
Markov analysis
Markov processes
Mathematics
Mathematics and Statistics
Organisms
Polytopes
Processor Architectures
Proteins
Software Engineering/Programming and Operating Systems
Studies
Systems Analysis
Systems Theory
Variables
title Recognition of DNA gene fragments using hidden Markov models
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