5'‐ O ‐(2‐Isopropoxyprop‐2‐yl)‐protected Phosphoramidite Building Blocks in the Liquid Phase Oligonucleotide Synthesis

5'‐ O ‐(2‐isopropoxyprop‐2‐yl) (IIP)‐protection was introduced to 5’‐OH function of nucleosides in high yields by an acid‐catalysed transacetalization with 2,2‐diisopropoxypropane. The applicability of this temporal 5’‐ O ‐protecting group was demonstrated in the liquid phase oligonucleotide sy...

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Veröffentlicht in:European journal of organic chemistry 2023-09, Vol.26 (36)
Hauptverfasser: Liang, Zehong, Rosenqvist, Petja, Pajuniemi, Ella, Ora, Mikko, Heinonen, Petri, Virta, Pasi, Oivanen, Mikko
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Sprache:eng
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Zusammenfassung:5'‐ O ‐(2‐isopropoxyprop‐2‐yl) (IIP)‐protection was introduced to 5’‐OH function of nucleosides in high yields by an acid‐catalysed transacetalization with 2,2‐diisopropoxypropane. The applicability of this temporal 5’‐ O ‐protecting group was demonstrated in the liquid phase oligonucleotide synthesis (LPOS) using the corresponding phosphoramidite building blocks (dA, dG, dC and dT) and a tetrapodal precipitative soluble support. Standard protecting groups were used on nucleobases. Tetrazole as an activator, followed by oxidation using m ‐chloroperbenzoic acid, was used for the coupling. The IIP was shown to be a capable choice to the 5’‐ O protection in solution phase synthesis. It could be readily removed with formic acid ( t 1/2
ISSN:1434-193X
1099-0690
DOI:10.1002/ejoc.202300614