Efficient Free-energy Calculation of Proton Transfer by Constrained Density Functional Theory and Geometrically Restrained Molecular Dynamics Simulation
Recently, we proposed an MD simulation scheme for free-energy calculations of proton transfers that employs the constrained DFT method and the energy-gap coordinate. The present paper proposes to streamline the free-energy calculations by using adiabatic MD trajectories and umbrella sampling with ge...
Gespeichert in:
Veröffentlicht in: | Chemistry letters 2021-07, Vol.50 (7), p.1325-1328 |
---|---|
Hauptverfasser: | , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
Zusammenfassung: | Recently, we proposed an MD simulation scheme for free-energy calculations of proton transfers that employs the constrained DFT method and the energy-gap coordinate. The present paper proposes to streamline the free-energy calculations by using adiabatic MD trajectories and umbrella sampling with geometric coordinates. The calculated free-energy profile reproduces the more accurate results by the free-energy perturbation. |
---|---|
ISSN: | 0366-7022 1348-0715 |
DOI: | 10.1246/cl.210132 |