DNA sequencing using nanopores and kinetic proofreading

We discuss the feasibility of using a nanopore sandwich device to implement the principle of kinetic proofreading to discriminate incorrect hybridizing oligonucleotides on a target DNA or RNA. We propose a method of sequencing DNA or RNA using this approach. The design parameters for such a DNA sequ...

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Veröffentlicht in:Quantitative biology 2020-09, Vol.8 (3), p.187-194
1. Verfasser: Ling, Xinsheng Sean
Format: Artikel
Sprache:eng
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Zusammenfassung:We discuss the feasibility of using a nanopore sandwich device to implement the principle of kinetic proofreading to discriminate incorrect hybridizing oligonucleotides on a target DNA or RNA. We propose a method of sequencing DNA or RNA using this approach. The design parameters for such a DNA sequencer are estimated from the Hopfield-Ninio theory of kinetic proofreading and Schrödinger's first-passage-time distribution function.
ISSN:2095-4689
2095-4697
DOI:10.1007/s40484-020-0201-x