Twenty-nine SNP markers developed from the transcriptomics of rainbow clam Moerella iridescens and their application in population genetics

The rainbow clam Moerella iridescens is an ecologically important small marine clam located along China’s coastlines, as well as the Northwest Pacific coasts. Among 75 M. iridescens sequences from the total tissue transcriptome database, 29 show polymorphisms by the resolution melting (HRM) method....

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Veröffentlicht in:	Conservation genetics resources 2018-09, Vol.10 (3), p.277-279
Hauptverfasser:	Dong, Zhiguo, Zhang, Dongdong, Li, Xiaoying, Lu, Xuan, Chen, Lei, Niu, Donghong, Li, Jiale
Format:	Artikel
Sprache:	eng
Schlagworte:	Animal Genetics and Genomics Biodiversity Biomedical and Life Sciences China clams coasts Conservation Biology/Ecology Ecology Evolutionary Biology Gene expression Genetic diversity genetic variation Heterozygosity Life Sciences loci melting Plant Genetics and Genomics Population genetics Population studies Single-nucleotide polymorphism Technical Note transcriptome transcriptomics
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Zusammenfassung:	The rainbow clam Moerella iridescens is an ecologically important small marine clam located along China’s coastlines, as well as the Northwest Pacific coasts. Among 75 M. iridescens sequences from the total tissue transcriptome database, 29 show polymorphisms by the resolution melting (HRM) method. The observed and expected heterozygosity ranged from 0.1500 to 1.0000 and from 0.0526 to 0.5128, respectively. Ten loci were found to deviate significantly from the Hardy–Weinberg equilibrium ( P
ISSN:	1877-7252 1877-7260
DOI:	10.1007/s12686-017-0801-6