Microvirga arsenatis sp. nov., an arsenate reduction bacterium isolated from Tibet hot spring sediments

Two novel Gram-stain negative, moderately thermophilic, aerobic, rod-shaped strains, designated 3D203 T and 3D207, were isolated from hot spring sediment samples collected from Tibet, western China. Phylogenetic analyses based on 16S rRNA gene sequence similarities showed that two isolates belonged...

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Veröffentlicht in:Antonie van Leeuwenhoek 2020-08, Vol.113 (8), p.1147-1153
Hauptverfasser: Liu, Ze-Tao, Xian, Wen-Dong, Li, Meng-Meng, Liu, Lan, Ming, Yu-Zhen, Jiao, Jian-Yu, Fang, Bao-Zhu, Xiao, Min, Li, Wen-Jun
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Sprache:eng
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Zusammenfassung:Two novel Gram-stain negative, moderately thermophilic, aerobic, rod-shaped strains, designated 3D203 T and 3D207, were isolated from hot spring sediment samples collected from Tibet, western China. Phylogenetic analyses based on 16S rRNA gene sequence similarities showed that two isolates belonged to the genus Microvirga and were most closely related to Microvirga makkahensis SV1470 T (98.5% and 98.4%, respectively) and two strains had 99.8% similarity to each other. The average nucleotide identity (ANI) based on whole genome sequences of two strains and M. makkahensis SV1470 T was 80.8% and 80.78%, respectively. Optimum growth was observed at 45 °C, pH 7.0 and 0.5% NaCl. They both could tolerate to high concentration arsenic. Ubiquinone 10 (Q10) was their predominant quinone. The differences of strains 3D203 T and 3D207 were phosphatidyl dimethyl ethanolamine, phosphatidyl-N-methylethanolamine, phosphatidylglycerol, unidentified glycolipids and unidentified lipids. The major fatty acids (> 5%) were identified C 18:1 ω 7 c and/or C 18:1 ω 6 c , C 18:0 and C 16:0 . The genomic DNA G + C contents of strain 3D203 T and 3D207 based on whole genome sequences were 64.8% and 64.7%, respectively. Phenotypic, chemotaxonomic, phylogenetic and genomic analyses suggested that two strains represent a novel species of the genus Microvirga , for which the name Microvirga arsenatis sp. nov. is proposed. The type strain is 3D203 T (= CGMCC 1.17691 T  = KCTC 72653 T ).
ISSN:0003-6072
1572-9699
DOI:10.1007/s10482-020-01421-6