Characterization of nine novel microsatellites isolated from Mozambique tilapia, Oreochromis mossambicus
Nine polymorphic microsatellites were isolated from a genomic DNA library of Oreochromis mossambicus enriched with di- and tetranucleotide repeats. The three di- and six tetranucleotide-type markers were characterized in 40 Mozambique tilapia individuals collected from a local farm. The number of al...
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Veröffentlicht in: | Conservation genetics resources 2010-09, Vol.2 (Suppl 1), p.385-387 |
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Sprache: | eng |
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Zusammenfassung: | Nine polymorphic microsatellites were isolated from a genomic DNA library of
Oreochromis mossambicus
enriched with di- and tetranucleotide repeats. The three di- and six tetranucleotide-type markers were characterized in 40 Mozambique tilapia individuals collected from a local farm. The number of alleles at the nine microsatellite loci ranged from 3 to 31, with an average of 13.4/locus. The average expected heterozygosity was 0.79 (range: 0.65–0.94), whereas the average observed heterozygosity was 0.67 (range: 0.33–1). Three loci significantly deviated from Hardy–Weinberg equilibrium, presumably due to limited population size. Cross-species amplification was successful for seven markers in
Oreochromis niloticus
, a phylogenetically closely related species and for six markers in
Pseudotropheus lombardi
, an ornamental cichlid for which no microsatellites have been described to date. These markers could provide important tools for the determination of genetic diversity and population structure of
O. mossambicus
. |
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ISSN: | 1877-7252 1877-7260 |
DOI: | 10.1007/s12686-010-9265-7 |