First Gene Cassettes of Integrons as Targets in Finding Adaptive Genes in Metagenomes
The first gene cassettes of integrons are involved in the last adaptation response to changing conditions and are also the most expressed. We propose a rapid method for the selection of clones carrying an integron first gene cassette that is useful for finding adaptive genes in environmental metagen...
Gespeichert in:
| Veröffentlicht in: | Applied and Environmental Microbiology 2009-06, Vol.75 (11), p.3823-3825 |
|---|---|
| Hauptverfasser: | , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 3825 |
|---|---|
| container_issue | 11 |
| container_start_page | 3823 |
| container_title | Applied and Environmental Microbiology |
| container_volume | 75 |
| creator | Huang, Lionel Cagnon, Christine Caumette, Pierre Duran, Robert |
| description | The first gene cassettes of integrons are involved in the last adaptation response to changing conditions and are also the most expressed. We propose a rapid method for the selection of clones carrying an integron first gene cassette that is useful for finding adaptive genes in environmental metagenomic libraries. |
| doi_str_mv | 10.1128/AEM.02394-08 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_fao_a</sourceid><recordid>TN_cdi_proquest_journals_205959052</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1731790271</sourcerecordid><originalsourceid>FETCH-LOGICAL-c555t-16e259ef8ccdf57fff59dae55ff2c8f57cee6dcfd7d610463e99bc74be079e833</originalsourceid><addsrcrecordid>eNqFkk2LFDEQhhtR3HH15lkbQUGw10rSSScXYRj2C2bx4O45ZNKVnizT6THpGfHfm_lgV_fiqaDqqbdeqqoo3hI4I4TKr9PzmzOgTNUVyGfFhICSFWdMPC8mAEpVlNZwUrxK6R4AahDyZXFCFBMMGjYp7i58TGN5iQHLmUkJxxFTObjyOozYxSGk0qTy1sQOx1T6UF740PrQldPWrEe_xX3rvnKDo-kwDD2m18ULZ1YJ3xzjaZ5zfju7qubfL69n03llOedjRQRSrtBJa1vHG-ccV61Bzp2jVuaMRRStdW3TCgK1YKjUwjb1AqFRKBk7Lb4ddNebRY-txTBGs9Lr6HsTf-vBeP1vJfil7oatpkI2VPAs8PkgsHzSdjWd610OiGBEgtySzH46DovDzw2mUfc-WVytTMBhk7RoaNMA-z9ICc-XqHf2PzwB74dNDHljmgJXXAGnGfpygGwcUoroHnwS0LsP0PkD9P4DNMiMv_t7JY_w8eQZ-HgETLJm5aIJ1qcHLpurgSryaG7pu-UvH1Gb1GuDvW54nquZpDux9wfImUGbLmahux8UCNvtTVDVsD8Y_cy4</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>205959052</pqid></control><display><type>article</type><title>First Gene Cassettes of Integrons as Targets in Finding Adaptive Genes in Metagenomes</title><source>MEDLINE</source><source>American Society for Microbiology Journals</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>PubMed Central</source><source>Alma/SFX Local Collection</source><creator>Huang, Lionel ; Cagnon, Christine ; Caumette, Pierre ; Duran, Robert</creator><creatorcontrib>Huang, Lionel ; Cagnon, Christine ; Caumette, Pierre ; Duran, Robert</creatorcontrib><description>The first gene cassettes of integrons are involved in the last adaptation response to changing conditions and are also the most expressed. We propose a rapid method for the selection of clones carrying an integron first gene cassette that is useful for finding adaptive genes in environmental metagenomic libraries.</description><identifier>ISSN: 0099-2240</identifier><identifier>EISSN: 1098-5336</identifier><identifier>EISSN: 1098-6596</identifier><identifier>DOI: 10.1128/AEM.02394-08</identifier><identifier>PMID: 19363073</identifier><identifier>CODEN: AEMIDF</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Adaptation, Biological ; Bacteria - genetics ; Biological and medical sciences ; Cloning ; DNA, Bacterial - chemistry ; DNA, Bacterial - genetics ; Ecology, environment ; Fundamental and applied biological sciences. Psychology ; Genes ; Genetics and Molecular Biology ; Genomics ; Integrons ; Life Sciences ; Microbiology ; Molecular Sequence Data ; Sequence Analysis, DNA</subject><ispartof>Applied and Environmental Microbiology, 2009-06, Vol.75 (11), p.3823-3825</ispartof><rights>2009 INIST-CNRS</rights><rights>Copyright American Society for Microbiology Jun 2009</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>Copyright © 2009, American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c555t-16e259ef8ccdf57fff59dae55ff2c8f57cee6dcfd7d610463e99bc74be079e833</citedby><cites>FETCH-LOGICAL-c555t-16e259ef8ccdf57fff59dae55ff2c8f57cee6dcfd7d610463e99bc74be079e833</cites><orcidid>0000-0002-2351-8553 ; 0000-0003-0622-8754</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2687265/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2687265/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,3175,3176,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=21540291$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19363073$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-01631808$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Huang, Lionel</creatorcontrib><creatorcontrib>Cagnon, Christine</creatorcontrib><creatorcontrib>Caumette, Pierre</creatorcontrib><creatorcontrib>Duran, Robert</creatorcontrib><title>First Gene Cassettes of Integrons as Targets in Finding Adaptive Genes in Metagenomes</title><title>Applied and Environmental Microbiology</title><addtitle>Appl Environ Microbiol</addtitle><description>The first gene cassettes of integrons are involved in the last adaptation response to changing conditions and are also the most expressed. We propose a rapid method for the selection of clones carrying an integron first gene cassette that is useful for finding adaptive genes in environmental metagenomic libraries.</description><subject>Adaptation, Biological</subject><subject>Bacteria - genetics</subject><subject>Biological and medical sciences</subject><subject>Cloning</subject><subject>DNA, Bacterial - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>Ecology, environment</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes</subject><subject>Genetics and Molecular Biology</subject><subject>Genomics</subject><subject>Integrons</subject><subject>Life Sciences</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Sequence Analysis, DNA</subject><issn>0099-2240</issn><issn>1098-5336</issn><issn>1098-6596</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkk2LFDEQhhtR3HH15lkbQUGw10rSSScXYRj2C2bx4O45ZNKVnizT6THpGfHfm_lgV_fiqaDqqbdeqqoo3hI4I4TKr9PzmzOgTNUVyGfFhICSFWdMPC8mAEpVlNZwUrxK6R4AahDyZXFCFBMMGjYp7i58TGN5iQHLmUkJxxFTObjyOozYxSGk0qTy1sQOx1T6UF740PrQldPWrEe_xX3rvnKDo-kwDD2m18ULZ1YJ3xzjaZ5zfju7qubfL69n03llOedjRQRSrtBJa1vHG-ccV61Bzp2jVuaMRRStdW3TCgK1YKjUwjb1AqFRKBk7Lb4ddNebRY-txTBGs9Lr6HsTf-vBeP1vJfil7oatpkI2VPAs8PkgsHzSdjWd610OiGBEgtySzH46DovDzw2mUfc-WVytTMBhk7RoaNMA-z9ICc-XqHf2PzwB74dNDHljmgJXXAGnGfpygGwcUoroHnwS0LsP0PkD9P4DNMiMv_t7JY_w8eQZ-HgETLJm5aIJ1qcHLpurgSryaG7pu-UvH1Gb1GuDvW54nquZpDux9wfImUGbLmahux8UCNvtTVDVsD8Y_cy4</recordid><startdate>20090601</startdate><enddate>20090601</enddate><creator>Huang, Lionel</creator><creator>Cagnon, Christine</creator><creator>Caumette, Pierre</creator><creator>Duran, Robert</creator><general>American Society for Microbiology</general><general>American Society for Microbiology (ASM)</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope><scope>1XC</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-2351-8553</orcidid><orcidid>https://orcid.org/0000-0003-0622-8754</orcidid></search><sort><creationdate>20090601</creationdate><title>First Gene Cassettes of Integrons as Targets in Finding Adaptive Genes in Metagenomes</title><author>Huang, Lionel ; Cagnon, Christine ; Caumette, Pierre ; Duran, Robert</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c555t-16e259ef8ccdf57fff59dae55ff2c8f57cee6dcfd7d610463e99bc74be079e833</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Adaptation, Biological</topic><topic>Bacteria - genetics</topic><topic>Biological and medical sciences</topic><topic>Cloning</topic><topic>DNA, Bacterial - chemistry</topic><topic>DNA, Bacterial - genetics</topic><topic>Ecology, environment</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genes</topic><topic>Genetics and Molecular Biology</topic><topic>Genomics</topic><topic>Integrons</topic><topic>Life Sciences</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Sequence Analysis, DNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Huang, Lionel</creatorcontrib><creatorcontrib>Cagnon, Christine</creatorcontrib><creatorcontrib>Caumette, Pierre</creatorcontrib><creatorcontrib>Duran, Robert</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Applied and Environmental Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Huang, Lionel</au><au>Cagnon, Christine</au><au>Caumette, Pierre</au><au>Duran, Robert</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>First Gene Cassettes of Integrons as Targets in Finding Adaptive Genes in Metagenomes</atitle><jtitle>Applied and Environmental Microbiology</jtitle><addtitle>Appl Environ Microbiol</addtitle><date>2009-06-01</date><risdate>2009</risdate><volume>75</volume><issue>11</issue><spage>3823</spage><epage>3825</epage><pages>3823-3825</pages><issn>0099-2240</issn><eissn>1098-5336</eissn><eissn>1098-6596</eissn><coden>AEMIDF</coden><abstract>The first gene cassettes of integrons are involved in the last adaptation response to changing conditions and are also the most expressed. We propose a rapid method for the selection of clones carrying an integron first gene cassette that is useful for finding adaptive genes in environmental metagenomic libraries.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>19363073</pmid><doi>10.1128/AEM.02394-08</doi><tpages>3</tpages><orcidid>https://orcid.org/0000-0002-2351-8553</orcidid><orcidid>https://orcid.org/0000-0003-0622-8754</orcidid><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0099-2240 |
| ispartof | Applied and Environmental Microbiology, 2009-06, Vol.75 (11), p.3823-3825 |
| issn | 0099-2240 1098-5336 1098-6596 |
| language | eng |
| recordid | cdi_proquest_journals_205959052 |
| source | MEDLINE; American Society for Microbiology Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; Alma/SFX Local Collection |
| subjects | Adaptation, Biological Bacteria - genetics Biological and medical sciences Cloning DNA, Bacterial - chemistry DNA, Bacterial - genetics Ecology, environment Fundamental and applied biological sciences. Psychology Genes Genetics and Molecular Biology Genomics Integrons Life Sciences Microbiology Molecular Sequence Data Sequence Analysis, DNA |
| title | First Gene Cassettes of Integrons as Targets in Finding Adaptive Genes in Metagenomes |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-30T00%3A42%3A18IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_fao_a&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=First%20Gene%20Cassettes%20of%20Integrons%20as%20Targets%20in%20Finding%20Adaptive%20Genes%20in%20Metagenomes&rft.jtitle=Applied%20and%20Environmental%20Microbiology&rft.au=Huang,%20Lionel&rft.date=2009-06-01&rft.volume=75&rft.issue=11&rft.spage=3823&rft.epage=3825&rft.pages=3823-3825&rft.issn=0099-2240&rft.eissn=1098-5336&rft.coden=AEMIDF&rft_id=info:doi/10.1128/AEM.02394-08&rft_dat=%3Cproquest_fao_a%3E1731790271%3C/proquest_fao_a%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=205959052&rft_id=info:pmid/19363073&rfr_iscdi=true |