Antarctic bioprospecting: in pursuit of microorganisms producing new antimicrobials and enzymes
Intensive efforts are being made to find new compounds with antimicrobial activity. The search for these novel bio-products in sparsely explored environments may be the key to providing solutions for many emerging problems. Antarctic environments are valuable locations for bioprospecting. In this st...
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Veröffentlicht in: | Polar biology 2018-07, Vol.41 (7), p.1417-1433 |
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Format: | Artikel |
Sprache: | eng |
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Zusammenfassung: | Intensive efforts are being made to find new compounds with antimicrobial activity. The search for these novel bio-products in sparsely explored environments may be the key to providing solutions for many emerging problems. Antarctic environments are valuable locations for bioprospecting. In this study, 63 cold-adapted bacterial strains of 6100 different colony morphotypes were isolated from Antarctic seawater samples around South Shetland and Deception islands. Strains were selected based on cold-active antimicrobial production and were grouped into 11 operational taxonomic units by internal spacer region-PCR and amplified ribosomal DNA restriction analysis. Isolates arbitrarily named 2D, 5D, and 6D were closely related to
Halomonas titanicae
, with 99.8, 98.9, and 96.7% identity according to 16S rDNA sequencing, and 99.7, 99.3, and 98.3% according to
gyrB
region sequence analysis, respectively. The isolate 18SH was closely related to
Candida sake
(99.2%) based on sequence analysis of the ITS1–5.8S rDNA–ITS2 and D1/D2 domain of 26S rDNA. Antimicrobials produced by isolates 2D, 5D, and 6D exhibited a low-molecular weight ( |
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ISSN: | 0722-4060 1432-2056 |
DOI: | 10.1007/s00300-018-2295-4 |