Development of Novel Small InDel Markers in Jute (Corchorus spp.)

Development of Novel Small InDel Markers in Jute (Corchorus spp.)

Jute, including white and dark jute, is an agroeconomically important fiber crop worldwide. However, no practical information is available for expressed sequence tag-derived InDel (insertion and deletion) in jute to date. Previously, we de novo assembled 48,914 unigenes from white jute. In this stud...

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Veröffentlicht in:Tropical plant biology 2017-12, Vol.10 (4), p.169-176
Hauptverfasser: Zhang, Lilan, Gao, Zizhen, Wan, Xuebei, Xu, Yi, Zhang, Liemei, Tao, Aifen, Fang, Pingping, Qi, Jianmin, Zhang, Liwu
Format: Artikel
Sprache:eng
Schlagworte:
Biomedical and Life Sciences
Cellulose
Cellulose fibers
Clonal deletion
Corchorus aestuans
Expressed sequence tags
Germplasm
Insertion
Jute
Life Sciences
Markers
Plant Breeding/Biotechnology
Plant Ecology
Plant Genetics and Genomics
Plant Sciences
Polymorphism
Transcription factors
Transgenics
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Zusammenfassung:Jute, including white and dark jute, is an agroeconomically important fiber crop worldwide. However, no practical information is available for expressed sequence tag-derived InDel (insertion and deletion) in jute to date. Previously, we de novo assembled 48,914 unigenes from white jute. In this study, 4815 InDels were called from these unigenes. The size
ISSN:1935-9756
1935-9764
DOI:10.1007/s12042-017-9193-8