Analyzing the Data Bank of Proteins Space Structures (PDB): A Geometrical Approach

A geometrical approach to the analysis of a data bank containing information on space structures of proteins is suggested. As a result of the analysis, several relationships concerning possible conformations are found, and also there is obtained a list of polypeptides whose structures differ essenti...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of mathematical sciences (New York, N.Y.) N.Y.), 2017-09, Vol.225 (4), p.555-564
Hauptverfasser: Vilkul, E. A., Ivanov, A. O., Mishchenko, A. S., Popelenskii, Th. Yu, Tuzhilin, A. A., Shaytan, K. V.
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Beschreibung
Zusammenfassung:A geometrical approach to the analysis of a data bank containing information on space structures of proteins is suggested. As a result of the analysis, several relationships concerning possible conformations are found, and also there is obtained a list of polypeptides whose structures differ essentially from typical concepts of the 3D-structure of proteins. Those deviations could indicate possible errors and gaps of the interpreting models in use, as well as some new unknown relations and rules.
ISSN:1072-3374
1573-8795
DOI:10.1007/s10958-017-3477-2