N-Methyl-trimethylacetamide in Thin Films Displays Infrared Spectra of [pi]-Helices, with Visible Static and Dynamic Growth Phases, and then a [beta]-Sheet

The simplest (minimal) peptide model is HCONHCH3. An increase in the π-helix content with increased substitution in the acyl portion suggested the examination of N-methyl-trimethylacetamide) (NMT). NMT displays spectra, in which there is evolution of a set of helices defined by their amide I maxima...

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Veröffentlicht in:Chemphyschem 2014-11, Vol.15 (16), p.3592
Hauptverfasser: Kosower, Edward M, Borz, Galina, Goldberg, Israel, Ermakov, Natalya
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Sprache:eng
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Zusammenfassung:The simplest (minimal) peptide model is HCONHCH3. An increase in the π-helix content with increased substitution in the acyl portion suggested the examination of N-methyl-trimethylacetamide) (NMT). NMT displays spectra, in which there is evolution of a set of helices defined by their amide I maxima near 1686 (310), 1655 (first π), and, most importantly, at 1637 cm-1 (π). Expanded thin-film infrared spectroscopy (XTFIS) shows pauses or slow stages, which are identified as static phases followed by dynamic phases with the incremental gain or loss of a helix turn. In addition, absorbance at 1637 cm-1 suddenly increases at 82.1 s (30% over 0.3 s), indicating a phase change and crystallization of the π-helix, along with a coincidental decrease in the absorbance for the first π-helix. A sharp peak occurs at the maximum of the phase change at 82.5 s, representing a pure NMT π-helix. The spectra then undergo a decreasing general absorption loss over 150 s, with the π-helix evolving further to an antiparallel [beta]-sheet fragment. The spectral quality arises from the immobilization of polar molecules on polar surfaces. The crystal structure is that of an antiparallel [beta]-sheet.
ISSN:1439-4235
1439-7641
DOI:10.1002/cphc.201402326